Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01519 and RBAM_009240

See DNA alignment / Visit BSNT_01519 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence pep-align/BSNT_01519___yhbF.1.9828.seq
#    -bsequence pep-align/RBAM_009240___yhbF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01519___yhbF-RBAM_009240___yhbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01519___yhbF-RBAM_009240___yhbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01519___yhbF
# 2: RBAM_009240___yhbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     135/236 (57.2%)
# Similarity:   171/236 (72.5%)
# Gaps:           1/236 ( 0.4%)
# Score: 707.0
# 
#
#=======================================

BSNT_01519___      1 METT-KLGNLKLYGAGHAAGGAYHNVSIKGEGVVGEGLSAVGCRIYGTGL     49
                     |||| ||.:||:||||||:||:|.||||||||.|||||.:..|||:||||
RBAM_009240__      1 METTKKLSHLKMYGAGHASGGSYQNVSIKGEGTVGEGLQSERCRIFGTGL     50

BSNT_01519___     50 FLGKAETERLRVLGESECKGDLTAGKINIYGIMKVSGSLQFDRFNLKGQT     99
                     |||.||..||::.||.|..|||:|...|:.|.:||.||::|....|||..
RBAM_009240__     51 FLGDAEINRLKIFGEHEVAGDLSARSANVIGTLKVGGSMRFATMRLKGLA    100

BSNT_01519___    100 EIGGNMTGESCDVKGKLSVKGDCETEMFHVTGCVDVSGLLNSGEIKLGLS    149
                     |||....||.|.:||.|:|.||||||:.|||||::|:||||:|:|.:.|.
RBAM_009240__    101 EIGNGAAGEQCHIKGSLTVGGDCETELLHVTGCINVAGLLNAGDINIHLR    150

BSNT_01519___    150 HDISHVQEIGGTTITVKRRASFFNRKKVKLIADVIEGDRVYLENTEAAVV    199
                     :|.|.|:|||||:|||:|:..|..||...|.|::||||.:|||.|||.:|
RBAM_009240__    151 YDRSRVKEIGGTSITVRRKPGFLKRKAGTLSAELIEGDAIYLEYTEADIV    200

BSNT_01519___    200 RGKEVIIGPGCSIGTIEYENKYECDPHSQIKEKTKL    235
                     |||.|.|||||.||.|||:...:....|.::|..|:
RBAM_009240__    201 RGKHVEIGPGCKIGKIEYQTSCKSHEKSTVQEHIKI    236


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