Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01436 and RBAM_008740

See DNA alignment / Visit BSNT_01436 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence pep-align/BSNT_01436___fabL.1.9828.seq
#    -bsequence pep-align/RBAM_008740___fabL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01436___fabL-RBAM_008740___fabL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01436___fabL-RBAM_008740___fabL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01436___fabL
# 2: RBAM_008740___fabL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     237/250 (94.8%)
# Similarity:   247/250 (98.8%)
# Gaps:           0/250 ( 0.0%)
# Score: 1205.0
# 
#
#=======================================

BSNT_01436___      1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE     50
                     ||||||||:|||||||||||||||||.|||||||||||||||||||||||
RBAM_008740__      1 MEQNKCALITGSSRGVGKAAAIRLAEKGYNIVINYARSKKAALETAEEIE     50

BSNT_01436___     51 KLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVME    100
                     |||||.||:|||||||||||:||:||||||||||||||||||||||||||
RBAM_008740__     51 KLGVKTLVIKANVGQPAKIKDMFRQIDETFGRLDVFVNNAASGVLRPVME    100

BSNT_01436___    101 LEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN    150
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_008740__    101 LEETHWDWTMNINAKALLFCAQEAAKMMEKNGGGHIVSISSLGSIRYLEN    150

BSNT_01436___    151 YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRED    200
                     ||||||||||||:||||||||||||.||||||||||||||||||||||::
RBAM_008740__    151 YTTVGVSKAALESLTRYLAVELSPKNIIVNAVSGGAIDTDALKHFPNRDE    200

BSNT_01436___    201 LLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLV    250
                     ||||||||||||||||||||:||||||||||||||||||||:||||||||
RBAM_008740__    201 LLEDARQNTPAGRMVEIKDMIDTVEFLVSSKADMIRGQTIIIDGGRSLLV    250


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.