Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00405 and RBAM_008620

See DNA alignment / Visit BSNT_00405 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence pep-align/BSNT_00405___ybfJ.1.9828.seq
#    -bsequence pep-align/RBAM_008620___ybfJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00405___ybfJ-RBAM_008620___ybfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00405___ybfJ-RBAM_008620___ybfJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00405___ybfJ
# 2: RBAM_008620___ybfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      63/132 (47.7%)
# Similarity:    80/132 (60.6%)
# Gaps:           3/132 ( 2.3%)
# Score: 306.5
# 
#
#=======================================

BSNT_00405___      1 MYSTIFNIGQINKYSKLAIFMSILFLCGCSSQTHSSQKETTIPVTLHVED     50
                     ||||.||||||||  ....|::...||||.....|:.|: .:||||||||
RBAM_008620__      1 MYSTTFNIGQINK--AFVFFLAAAVLCGCGKADDSAAKK-ALPVTLHVED     47

BSNT_00405___     51 AKGLPVEGVQVTIVKAPSSDEEPSTEIGEILGKTDKNGDIKWDTGRKGDY    100
                     |.|.|..||.||::||..||.:|:.:.|||:||||.:|:|.|.:|.||.|
RBAM_008620__     48 ADGSPAAGVTVTVMKAAESDHQPNIDRGEIIGKTDHHGEIAWKSGAKGTY     97

BSNT_00405___    101 SVALTKGETSVTHQISLTEDMKDHAIPLVFKE    132
                     :|...|.....|..|||.|..|...|.:..|:
RBAM_008620__     98 AVVFEKDGVPETRNISLAESDKHTVISITLKQ    129


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