Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01413 and RBAM_008560

See DNA alignment / Visit BSNT_01413 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01413___yfhD.1.9828.seq
#    -bsequence pep-align/RBAM_008560___yfhD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01413___yfhD-RBAM_008560___yfhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01413___yfhD-RBAM_008560___yfhD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01413___yfhD
# 2: RBAM_008560___yfhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      55/63 (87.3%)
# Similarity:    57/63 (90.5%)
# Gaps:           0/63 ( 0.0%)
# Score: 286.0
# 
#
#=======================================

BSNT_01413___      1 MGRNHIHKNRDKNKQKLPQVPDALKRETDGVYEEYSSELADADDREAQER     50
                     |||||.||||||||||||||||||||||||.||||||||||:.|||||.|
RBAM_008560__      1 MGRNHTHKNRDKNKQKLPQVPDALKRETDGTYEEYSSELADSADREAQAR     50

BSNT_01413___     51 AKAADNRAKKKSR     63
                     .||||||||.|:|
RBAM_008560__     51 MKAADNRAKSKTR     63


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