Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01398 and RBAM_008510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence pep-align/BSNT_01398.1.9828.seq
# -bsequence pep-align/RBAM_008510___yfiU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01398-RBAM_008510___yfiU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01398-RBAM_008510___yfiU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01398
# 2: RBAM_008510___yfiU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 530
# Identity: 247/530 (46.6%)
# Similarity: 266/530 (50.2%)
# Gaps: 217/530 (40.9%)
# Score: 1216.0
#
#
#=======================================
BSNT_01398 1 MSEALTEQKGQKWAISLFTIGVFMAALDNGIISAALTTINESFAVSPSWG 50
|.|.|..:|.|..||:||||||||||||||||||||||||.||.||||||
RBAM_008510__ 1 MPEPLQTEKNQSRAITLFTIGVFMAALDNGIISAALTTINSSFDVSPSWG 50
BSNT_01398 51 SWGITLYTLGLSVSVPIVGKLSDRYGRKKLFLIEVCLFGLGSLLVALSQS 100
|||:|||||||||||||||||||||||||||:|||.||||||||||||||
RBAM_008510__ 51 SWGVTLYTLGLSVSVPIVGKLSDRYGRKKLFMIEVGLFGLGSLLVALSQS 100
BSNT_01398 101 FPLFLISRLIQALGGGGIFIIGSSHILATLPKEKQGKALGLLGAMNGMAA 150
||:||.:||||||||||||||||||:||.|||||||||||||||||||||
RBAM_008510__ 101 FPMFLAARLIQALGGGGIFIIGSSHVLAVLPKEKQGKALGLLGAMNGMAA 150
BSNT_01398 151 VLGPNIGSFLLDWTGSWHWLFLINLPIAVLLVVFGSYFIAETKAPEAKRL 200
||||||||||||.|||||||||||||||..|||.|..||||||.||||||
RBAM_008510__ 151 VLGPNIGSFLLDVTGSWHWLFLINLPIAAALVVCGGLFIAETKEPEAKRL 200
BSNT_01398 201 DAAGIFLLSLSILAVMYGMTNLDGVNLLHSLGNPEVYGCIIFGILCFAAL 250
|.||..||||:||:.|.|:|||||..|..|:.:.:|||.::...|.|..|
RBAM_008510__ 201 DLAGTMLLSLAILSCMIGITNLDGAKLSESIMDVKVYGYLLGAALLFLVL 250
BSNT_01398 251 ISYEKRVEMRGGDPILAYSLLRNHMFQRTLIIGLLSGGLLAAVIFIPSYV 300
:..|||||.||||||||||||:|.:||.||:||.|||||||||||||||.
RBAM_008510__ 251 LKVEKRVENRGGDPILAYSLLQNKVFQWTLVIGFLSGGLLAAVIFIPSYA 300
BSNT_01398 301 EQYLGVPAAKAGY------------------------------------- 313
||||.|.|.||||
RBAM_008510__ 301 EQYLHVSAEKAGYWMTPLALASGIGAWLGGAITDKKGPVFSAVVSGAIAF 350
BSNT_01398 313 -------------------------------------------------- 313
RBAM_008510__ 351 AGFSLFPLWVTDKWEFVTASVIAGIGFGFLLGAPLNVLVSETAGQNKGTA 400
BSNT_01398 313 -------------------------------------------------- 313
RBAM_008510__ 401 LGTLSLVRQVGLTLAPALYAGFITAGFDRIGDDIKNRLAKSGIPADQAQM 450
BSNT_01398 313 -------------------------------------------------- 313
RBAM_008510__ 451 PDIGGGLSSLQEQVSRIPIPAVKKAVSDAIEAGIASGYHHLYTAAAVISL 500
BSNT_01398 313 ------------------------------ 313
RBAM_008510__ 501 CTIVSAAVLAYFRKPASSKTDASPSAGKAQ 530
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