Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01391 and RBAM_008470

See DNA alignment / Visit BSNT_01391 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:05
# Commandline: needle
#    -asequence pep-align/BSNT_01391___yfiQ.1.9828.seq
#    -bsequence pep-align/RBAM_008470___yfiQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01391___yfiQ-RBAM_008470___yfiQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01391___yfiQ-RBAM_008470___yfiQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01391___yfiQ
# 2: RBAM_008470___yfiQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity:     247/368 (67.1%)
# Similarity:   289/368 (78.5%)
# Gaps:          12/368 ( 3.3%)
# Score: 1291.0
# 
#
#=======================================

BSNT_01391___      1 MQIKEIFMIRCVSCLSVVLLHIISMVLMLQAEALADISHTVDSFRTLLMF     50
                     |||||||:|||:|||||||||::|||||:|.|:||..:||||:|||||||
RBAM_008470__      1 MQIKEIFVIRCLSCLSVVLLHVVSMVLMIQEESLASAAHTVDAFRTLLMF     50

BSNT_01391___     51 STPAFIFISEFLLARSYPDGVPDGFLKKRGKVIFVPFLFIAAIDALLMTS    100
                     ||||||||||||||||||.|||.|||||||||||||||||||:||:||.|
RBAM_008470__     51 STPAFIFISEFLLARSYPGGVPAGFLKKRGKVIFVPFLFIAAVDAILMKS    100

BSNT_01391___    101 AMGGEVTFLAFVQKYLANVFLGNFIGYFILVIFQFYMLHMMFHEYLKKAS    150
                     .......|::.:.|:|.|||||||||||||||||||:|||:.|.:|...|
RBAM_008470__    101 VAEEGAGFVSVIGKFLENVFLGNFIGYFILVIFQFYILHMLLHRWLNNKS    150

BSNT_01391___    151 PKWVLSISFVVTAAYLGYFSAASPAPASEEGGAFPFFWVPFAGWLFYFCL    200
                     |.||||:||::.|.||.|||...|..:|.....||||||||.||:|||||
RBAM_008470__    151 PMWVLSVSFIINAVYLAYFSIFHPPASSGLDSIFPFFWVPFPGWVFYFCL    200

BSNT_01391___    201 AYYCGKEYKRFLALLNQYRWVVYGAAIASGALVVTVSYVGEIGMISSKRP    250
                     |:||||||.|||:|:||||:.||.:|..|..|:|.|||:.. |.||||||
RBAM_008470__    201 AFYCGKEYPRFLSLINQYRYAVYLSAAVSAILIVAVSYISG-GSISSKRP    249

BSNT_01391___    251 DIMLYSTSMIFLCFHLFSKMKHVPKIMMFISNYSFSIYLLHAYFMIIGYV    300
                     |||:|:.||||||||||||:|.||.|:|.||||||||||||:||:|.||:
RBAM_008470__    250 DIMIYAVSMIFLCFHLFSKLKKVPAIVMMISNYSFSIYLLHSYFLISGYL    299

BSNT_01391___    301 L---LLNMPEIPAVPAVLLLFAVCTAGPILTSWALNKFKYGYLFVGKIYQ    347
                     |   |.:|| :||  |:||||.:||.|||..||..|.|:||||||||:||
RBAM_008470__    300 LEGYLRSMP-LPA--AILLLFLICTLGPIFLSWVCNHFRYGYLFVGKVYQ    346

BSNT_01391___    348 PKQKKVTVEVRDHAG---    362
                     |||.|.....  |.|   
RBAM_008470__    347 PKQTKRNTAA--HQGRTV    362


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