Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01391 and RBAM_008470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence pep-align/BSNT_01391___yfiQ.1.9828.seq
# -bsequence pep-align/RBAM_008470___yfiQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01391___yfiQ-RBAM_008470___yfiQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01391___yfiQ-RBAM_008470___yfiQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01391___yfiQ
# 2: RBAM_008470___yfiQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity: 247/368 (67.1%)
# Similarity: 289/368 (78.5%)
# Gaps: 12/368 ( 3.3%)
# Score: 1291.0
#
#
#=======================================
BSNT_01391___ 1 MQIKEIFMIRCVSCLSVVLLHIISMVLMLQAEALADISHTVDSFRTLLMF 50
|||||||:|||:|||||||||::|||||:|.|:||..:||||:|||||||
RBAM_008470__ 1 MQIKEIFVIRCLSCLSVVLLHVVSMVLMIQEESLASAAHTVDAFRTLLMF 50
BSNT_01391___ 51 STPAFIFISEFLLARSYPDGVPDGFLKKRGKVIFVPFLFIAAIDALLMTS 100
||||||||||||||||||.|||.|||||||||||||||||||:||:||.|
RBAM_008470__ 51 STPAFIFISEFLLARSYPGGVPAGFLKKRGKVIFVPFLFIAAVDAILMKS 100
BSNT_01391___ 101 AMGGEVTFLAFVQKYLANVFLGNFIGYFILVIFQFYMLHMMFHEYLKKAS 150
.......|::.:.|:|.|||||||||||||||||||:|||:.|.:|...|
RBAM_008470__ 101 VAEEGAGFVSVIGKFLENVFLGNFIGYFILVIFQFYILHMLLHRWLNNKS 150
BSNT_01391___ 151 PKWVLSISFVVTAAYLGYFSAASPAPASEEGGAFPFFWVPFAGWLFYFCL 200
|.||||:||::.|.||.|||...|..:|.....||||||||.||:|||||
RBAM_008470__ 151 PMWVLSVSFIINAVYLAYFSIFHPPASSGLDSIFPFFWVPFPGWVFYFCL 200
BSNT_01391___ 201 AYYCGKEYKRFLALLNQYRWVVYGAAIASGALVVTVSYVGEIGMISSKRP 250
|:||||||.|||:|:||||:.||.:|..|..|:|.|||:.. |.||||||
RBAM_008470__ 201 AFYCGKEYPRFLSLINQYRYAVYLSAAVSAILIVAVSYISG-GSISSKRP 249
BSNT_01391___ 251 DIMLYSTSMIFLCFHLFSKMKHVPKIMMFISNYSFSIYLLHAYFMIIGYV 300
|||:|:.||||||||||||:|.||.|:|.||||||||||||:||:|.||:
RBAM_008470__ 250 DIMIYAVSMIFLCFHLFSKLKKVPAIVMMISNYSFSIYLLHSYFLISGYL 299
BSNT_01391___ 301 L---LLNMPEIPAVPAVLLLFAVCTAGPILTSWALNKFKYGYLFVGKIYQ 347
| |.:|| :|| |:||||.:||.|||..||..|.|:||||||||:||
RBAM_008470__ 300 LEGYLRSMP-LPA--AILLLFLICTLGPIFLSWVCNHFRYGYLFVGKVYQ 346
BSNT_01391___ 348 PKQKKVTVEVRDHAG--- 362
|||.|..... |.|
RBAM_008470__ 347 PKQTKRNTAA--HQGRTV 362
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