Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01366 and RBAM_008400

See DNA alignment / Visit BSNT_01366 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_01366___yfiB.1.9828.seq
#    -bsequence pep-align/RBAM_008400___yfiB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01366___yfiB-RBAM_008400___yfiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01366___yfiB-RBAM_008400___yfiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01366___yfiB
# 2: RBAM_008400___yfiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 577
# Identity:     447/577 (77.5%)
# Similarity:   515/577 (89.3%)
# Gaps:           4/577 ( 0.7%)
# Score: 2293.0
# 
#
#=======================================

BSNT_01366___      1 MQKALSFLKPYSLLAGIALILMLTELAVELMQPLLIAKIIDDGILKQDLR     50
                     |.||||::|||||||||||..||.||||||:|||||.||||:|||||||.
RBAM_008400__      1 MSKALSYVKPYSLLAGIALFFMLIELAVELLQPLLIGKIIDEGILKQDLG     50

BSNT_01366___     51 HVWIWGAVMIGLTVLSFAAGMLNSFYAAHVSQSFSYDTRKGLFQKIQSFS    100
                     .||:||.||||||.:|||:|:|||||:||:|||::|||||||||||||||
RBAM_008400__     51 TVWLWGGVMIGLTAVSFASGILNSFYSAHISQSYAYDTRKGLFQKIQSFS    100

BSNT_01366___    101 YSTFGQFSSSSYITRLTNDVTQVQNMIFMSLRFMLRAPLMIAGGIVLSLA    150
                     ||||.||||:|:||||||||||||||:||||||||||||||||||:|||.
RBAM_008400__    101 YSTFAQFSSTSFITRLTNDVTQVQNMLFMSLRFMLRAPLMIAGGIILSLT    150

BSNT_01366___    151 VNVKLGFFLLVTIPILILFLLWVLRKGGALFRSVQKRLDQVNTIMQENLI    200
                     ||.|||||||:|:|||:|||||||::|||||||||||||||||||||||.
RBAM_008400__    151 VNAKLGFFLLITVPILLLFLLWVLKRGGALFRSVQKRLDQVNTIMQENLT    200

BSNT_01366___    201 AIKLIKALLRGSHEVKRFIKANTRLMEKTVSAFQLVEFTMPVLMLLMNLC    250
                     ||||||||||.:||||||:|:||:|||||||||:|||..||:||||||:|
RBAM_008400__    201 AIKLIKALLRANHEVKRFLKSNTKLMEKTVSAFRLVEAAMPILMLLMNIC    250

BSNT_01366___    251 ILLILWAGSYSITSGSTQVGDVVAIINYATRITGALSMFPFLIMIFTRAK    300
                     ||.|||.|:.||..|..||||||::||||||||||||:.|||||:|:|||
RBAM_008400__    251 ILFILWFGAKSIAQGGAQVGDVVSVINYATRITGALSVLPFLIMVFSRAK    300

BSNT_01366___    301 ASGDRIGEVLETEGDEREEGIIFDRLSGQIEFQHVSFRYPEMDREALRNV    350
                     |||:||||||||||.|.........|:|.|||:.||||||.|:::||.:|
RBAM_008400__    301 ASGERIGEVLETEGGEGTGQDPARALAGGIEFREVSFRYPGMEKDALHHV    350

BSNT_01366___    351 SFSAKPRETIAILGATGSGKSTLFQLIPRLYQPDSGRIYIDEKPVQDIPA    400
                     ||||.|:||:||:||||||||||||||||||..|||.|:||.||:.:..|
RBAM_008400__    351 SFSASPKETVAIMGATGSGKSTLFQLIPRLYTADSGSIFIDGKPIGEFSA    400

BSNT_01366___    401 EGLRRQIGYVPQEVLLFSGTIKENIAWGKENASLDEIMDAAKHAQIHETI    450
                     .||||:|||||||||||||||:||||||:|:|||||:|:|||.||||:||
RBAM_008400__    401 CGLRREIGYVPQEVLLFSGTIRENIAWGREDASLDEVMEAAKDAQIHDTI    450

BSNT_01366___    451 LKLPNGYDTVLGQRGVNLSGGQKQRISIARALIRKPAILLLDDSTSALDL    500
                     :||.|||||||||||||||||||||||||||.||||::||||||||||||
RBAM_008400__    451 MKLSNGYDTVLGQRGVNLSGGQKQRISIARAFIRKPSLLLLDDSTSALDL    500

BSNT_01366___    501 QTEAKLLEAISTYHCTTLIITQKITTAMKADQILLLEDGELIEKGTHSEL    550
                     |||||||:||.:|.|||||||||||||||||.|||||||||:.||||.||
RBAM_008400__    501 QTEAKLLQAIRSYECTTLIITQKITTAMKADTILLLEDGELLAKGTHKEL    550

BSNT_01366___    551 LSASQLYKRIYESQFGREGSESC----    573
                     ::.|.||::|||||||:||:::.    
RBAM_008400__    551 MAQSHLYRQIYESQFGKEGADNAKRHS    577


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01366 and RBAM_008400

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
