Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01362 and RBAM_008380

See DNA alignment / Visit BSNT_01362 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_01362___malP.1.9828.seq
#    -bsequence pep-align/RBAM_008380___glvC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01362___malP-RBAM_008380___glvC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01362___malP-RBAM_008380___glvC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01362___malP
# 2: RBAM_008380___glvC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 528
# Identity:     468/528 (88.6%)
# Similarity:   499/528 (94.5%)
# Gaps:           1/528 ( 0.2%)
# Score: 2446.0
# 
#
#=======================================

BSNT_01362___      1 MMQKIQRFGSAMFVPVLLFAFAGIIVGISTLFKNKTLMGPLADPDGFWYQ     50
                     ||||:||||||||||||||||:|||||:||||||||||||||||||.|||
RBAM_008380__      1 MMQKVQRFGSAMFVPVLLFAFSGIIVGLSTLFKNKTLMGPLADPDGLWYQ     50

BSNT_01362___     51 CWYIIEQGGWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYF    100
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_008380__     51 CWYVIEQGGWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYF    100

BSNT_01362___    101 VSAILTVWGGAFGVDMNQEVGGTSGLTMIAGIKTLDTNIIGAIFISSIVV    150
                     ::||||||||||.|||.||.||||||||||||||||||||||||||||||
RBAM_008380__    101 INAILTVWGGAFHVDMTQEAGGTSGLTMIAGIKTLDTNIIGAIFISSIVV    150

BSNT_01362___    151 FLHNRYFDKKLPDFLGIFQGSTYIVMISFFIMIPIALAVSYIWPMVQSGI    200
                     :||||||||||||||||||||:|||:|||||||||:|||:|:||||||||
RBAM_008380__    151 YLHNRYFDKKLPDFLGIFQGSSYIVIISFFIMIPISLAVAYVWPMVQSGI    200

BSNT_01362___    201 GSLQSFLVASGAVGVWIYTFLERILIPTGLHHFIYTPFIYGPAVAEGGIV    250
                     ||||||||:|||:||||||||||||||||||||||:||||||||||||||
RBAM_008380__    201 GSLQSFLVSSGAIGVWIYTFLERILIPTGLHHFIYSPFIYGPAVAEGGIV    250

BSNT_01362___    251 TYWAQHLGEYSQSAKPLKELFPQGGFALHGNSKIFGIPGIALAFYVTAKK    300
                     |||||||||||||.|||||||||||||||||||||||||||||||.||.|
RBAM_008380__    251 TYWAQHLGEYSQSVKPLKELFPQGGFALHGNSKIFGIPGIALAFYATASK    300

BSNT_01362___    301 EKKKLVAGLLIPVTLTAIVAGITEPIEFTFLFISPFLFAVHAVLAATMST    350
                     ||||:|||||||||||:|||||||||||||||||||||||||:|||:|:|
RBAM_008380__    301 EKKKIVAGLLIPVTLTSIVAGITEPIEFTFLFISPFLFAVHALLAASMAT    350

BSNT_01362___    351 VMYMAGVVGNMGGGLIEAVTLNWIPLFGSHGMTYVYQILIGLSFTAIYFF    400
                     ||||||||||||||||||.|||||||..|||:||||||:|||.|||:|||
RBAM_008380__    351 VMYMAGVVGNMGGGLIEAATLNWIPLASSHGLTYVYQIIIGLCFTAVYFF    400

BSNT_01362___    401 VFRFLILKFNIATPGREKDEQQETKLYSKKEYRERKN-KDETASAAETAD    449
                     ||||||||||||||||||:|.|||||||||||||||. ..|||:|.||..
RBAM_008380__    401 VFRFLILKFNIATPGREKEEGQETKLYSKKEYRERKQASKETAAADETQR    450

BSNT_01362___    450 DTAFLYIEALGGKDNITEVTNCATRLRVSVKDETKVEPDNVFRALGAHGV    499
                     |||.||||||||||||||||||||||||:|.||:||:.|..||.||||||
RBAM_008380__    451 DTAALYIEALGGKDNITEVTNCATRLRVTVADESKVKSDADFRELGAHGV    500

BSNT_01362___    500 VRNGKAFQVIIGLSVPQMRERVEKLLNE    527
                     ||.|:|.|||:||.||||||||||:||.
RBAM_008380__    501 VRKGRALQVIVGLGVPQMRERVEKILNG    528


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