Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01311 and RBAM_008030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_01311___yfkN.1.9828.seq
# -bsequence pep-align/RBAM_008030___yfkN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01311___yfkN-RBAM_008030___yfkN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01311___yfkN-RBAM_008030___yfkN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01311___yfkN
# 2: RBAM_008030___yfkN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1465
# Identity: 1050/1465 (71.7%)
# Similarity: 1207/1465 (82.4%)
# Gaps: 85/1465 ( 5.8%)
# Score: 5538.0
#
#
#=======================================
BSNT_01311___ 1 -----------------------------------------------MAT 3
:||
RBAM_008030__ 1 MRIQKRRCSVNMTLRILLPLVMILSLILPTSPIKAEENKSSSVNLSILAT 50
BSNT_01311___ 4 TDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQ 53
||:|||||||||||||.|.:||||||||||:|||.:||||||||||||||
RBAM_008030__ 51 TDVHANMMDYDYYSDKPTTEFGLARTAQLIEKHRRENPNTLLVDNGDLIQ 100
BSNT_01311___ 54 GNPLGEYAVKYQKDDIISGTKTHPIISVMNALKYDAGTLGNHEFNYGLDF 103
|||||||||||:|:|||||.||||||.|||:|.|||||||||||||||:|
RBAM_008030__ 101 GNPLGEYAVKYEKNDIISGAKTHPIIEVMNSLHYDAGTLGNHEFNYGLEF 150
BSNT_01311___ 104 LDGTIKGADFPIVNANVKTTSGKNRYTPYVINEKNLIDENGNEQKVKVGY 153
|||||||||:|||||||||.||:||||||||.:|.:.||||.:.::||||
RBAM_008030__ 151 LDGTIKGADYPIVNANVKTLSGENRYTPYVIKDKTVTDENGGKHQIKVGY 200
BSNT_01311___ 154 IGFVPPQIMTWDKKNLEGQVQVQDIVESANETIPKMKAEGADVIIALAHT 203
||||||||||||||||||:|||:||||||.:|:|||||||||::|||||:
RBAM_008030__ 201 IGFVPPQIMTWDKKNLEGRVQVEDIVESAKKTVPKMKAEGADIVIALAHS 250
BSNT_01311___ 204 GIEKQSQSSGAENAVFDLATKTKGIDAIISGHQHGLFPSAEYAGVAQFDV 253
||||::|||||||||||||||..|||||:|||||||||.|||.|..||||
RBAM_008030__ 251 GIEKKAQSSGAENAVFDLATKVSGIDAIVSGHQHGLFPDAEYKGADQFDV 300
BSNT_01311___ 254 EKGTINGIPVVMPSSWGKYLGVIDLKLEKADGSWKVADSKGSIESIAGNV 303
:|||||||||||.||||||.|||||:|||.|.:|.|.|:|||||.|||||
RBAM_008030__ 301 DKGTINGIPVVMSSSWGKYAGVIDLRLEKTDSAWHVEDAKGSIEPIAGNV 350
BSNT_01311___ 304 TSRNETVTNTIQQTHQNTLEYVRKPVGKTEADINSFFAQVKDDPSIQIVT 353
||.||||.||:::.|:.||:|:|:|||:|:||||||||||||||||||||
RBAM_008030__ 351 TSENETVVNTVKKAHEGTLKYIREPVGQTKADINSFFAQVKDDPSIQIVT 400
BSNT_01311___ 354 DAQKWYAEKEMKDTEYKDLPILSAGAPFKAGGRNGANYYTNIPAGDLAIK 403
||||||||.:|||||||||||||||||||||||||:||||||.|||||||
RBAM_008030__ 401 DAQKWYAENKMKDTEYKDLPILSAGAPFKAGGRNGSNYYTNISAGDLAIK 450
BSNT_01311___ 404 NVGDLYLYDNTVQIVKLTGSEVKDWLEMSAGQFNQIDPAKGGDQALLNEN 453
|:|||||||||||||||.|||||||||||||||||||.||||.|||||:.
RBAM_008030__ 451 NIGDLYLYDNTVQIVKLNGSEVKDWLEMSAGQFNQIDQAKGGSQALLNDA 500
BSNT_01311___ 454 FRSYNFDVIDGVTYQVDVTKPAKYNENGKVINADSSRIINLSYEGKPISP 503
:|||||||||||||||||||||||||||.||:.|:|||:||||:|||:|.
RBAM_008030__ 501 YRSYNFDVIDGVTYQVDVTKPAKYNENGTVIHPDASRIVNLSYQGKPVSA 550
BSNT_01311___ 504 SQEFLVVTNNYRASGGGGFPHLTSDKIVHGSAVENRQVLMDYIIEQKTVN 553
.||||:||||||||||||||||::||||:.||.|||||||||||:|||:|
RBAM_008030__ 551 KQEFLIVTNNYRASGGGGFPHLSNDKIVYSSADENRQVLMDYIIQQKTIN 600
BSNT_01311___ 554 PKADNNWSIAPVSGTNLTFESSLLAKPFADKADDVAYVGKSANEGYGVYK 603
|:||:||||.||.||||||||||.||||||:||||||:|:|.|.|||.||
RBAM_008030__ 601 PQADHNWSILPVKGTNLTFESSLAAKPFADRADDVAYIGESQNAGYGQYK 650
BSNT_01311___ 604 LQF-DDDSNPDPPKDGLWDLTVMHTNDTHAHLDDAARRMTKINEVRSETN 652
||| ||:...|||||..|.||||||||||||||:||||||||.|:||||:
RBAM_008030__ 651 LQFKDDEPGTDPPKDDAWKLTVMHTNDTHAHLDNAARRMTKIKEIRSETD 700
BSNT_01311___ 653 HNILLDAGDVFSGDLYFTKWNGLADLKMMNMMGYDAMTFGNHEFDKGPAV 702
.:||||||||||||||||||.||||||:||.|||||||||||||||||..
RBAM_008030__ 701 RSILLDAGDVFSGDLYFTKWQGLADLKLMNSMGYDAMTFGNHEFDKGPGA 750
BSNT_01311___ 703 LSDFLSGNSTTVDPANRYRFEAPEFPVVSANVDVSNEPKLSSYVKKPQTF 752
|:.|||||.:..||:.:|.|:||:||:||:|||||.|.||..::||..||
RBAM_008030__ 751 LASFLSGNGSAADPSGKYNFQAPDFPLVSSNVDVSKESKLRPFMKKADTF 800
BSNT_01311___ 753 RAGEKKAPGIHPYILLDVDGEKVAVFGLTTEDTATTSSPGKSIVFHDAFE 802
.||:||..||:|||||||:||||||||||||||:.||||||||||||||:
RBAM_008030__ 801 TAGKKKKAGIYPYILLDVNGEKVAVFGLTTEDTSVTSSPGKSIVFHDAFQ 850
BSNT_01311___ 803 TAQNTVKTIQEDEKVNKIIALTHIGHNRDLELAKKVKGIDLIIGGHTHTL 852
:||:|||.||..|.||||||||||||.|||:|||||||||||:|||||||
RBAM_008030__ 851 SAQDTVKEIQNKEHVNKIIALTHIGHQRDLDLAKKVKGIDLIVGGHTHTL 900
BSNT_01311___ 853 VDKMEVVNNEEPTIVAQAKEYGQFLGRVDVAFDENGVVQTDKSNLSVLPI 902
|||||||.||||||||||||||::|||.|||||:||||..::|:|..:|:
RBAM_008030__ 901 VDKMEVVKNEEPTIVAQAKEYGEYLGRADVAFDKNGVVLPEQSSLQAIPV 950
BSNT_01311___ 903 DEHTEENAEAKQELDQFKSELEDVKNEKVGYTDVALDGQREHVRTKETNL 952
:|.|:|:.:.|:|||.||.||..|||||||.|.|||||||||||:|||||
RBAM_008030__ 951 NEQTKEDPDLKKELDPFKKELVSVKNEKVGSTKVALDGQREHVRSKETNL 1000
BSNT_01311___ 953 GNFIADGMLAKAKEAAGARIAITNGGGIRAGIDKGDITLGEVLNVMPFGN 1002
|||||||||.||||||||:||||||||||||||||:||||:|||||||||
RBAM_008030__ 1001 GNFIADGMLQKAKEAAGAQIAITNGGGIRAGIDKGEITLGDVLNVMPFGN 1050
BSNT_01311___ 1003 TLYVADLTGKQIKEALEQGLSNVENGGGAFPQVAGIEYTFTLNNEPGHRV 1052
|||||||||||||:|||||||.:|..|||||||||:.||||||.:|||||
RBAM_008030__ 1051 TLYVADLTGKQIKQALEQGLSGIEAQGGAFPQVAGLTYTFTLNKKPGHRV 1100
BSNT_01311___ 1053 LEVKIELPNGDKVDLHTDDTYRVATNNFVGAGGDGYSVFTEASHGEDLGY 1102
|:......:|....:....||||||:||||.||||||||.||||.||||:
RBAM_008030__ 1101 LQAAAVQDDGSVKPISDKKTYRVATSNFVGEGGDGYSVFNEASHKEDLGF 1150
BSNT_01311___ 1103 VDYEIFTEQLKKLGNKVSPKIEGRIKEVFLPTKQKDGSWTLDEDK-FAIY 1151
||||:|||||:|.|..|.||::||.:||:||||||:|||||::|. ||.|
RBAM_008030__ 1151 VDYEVFTEQLEKAGKAVEPKVDGRAQEVYLPTKQKNGSWTLEDDSAFAAY 1200
BSNT_01311___ 1152 AKNANTPFVYYGTHEGSQEKPINLKVKKDQIKLLKERKSDSSLTVFNYWY 1201
|||||||.|||..::|: :|||:|.|.|.||.|||:|.||||||:.:..:
RBAM_008030__ 1201 AKNANTPIVYYDKNDGT-KKPIDLSVTKKQIGLLKDRTSDSSLTILHDKF 1249
BSNT_01311___ 1202 SMKLPMANLKTTDTSIGITSTGEFDVSLADVYDFTVRQKGKEIKSFKEPV 1251
|||:||||..:.||..|:|..|:...:|::|||||::||.|:||:||.||
RBAM_008030__ 1250 SMKMPMANAASADTRFGVTPKGKVSGALSNVYDFTMKQKNKDIKTFKAPV 1299
BSNT_01311___ 1252 QLSLRMFDIEEAHNPAIYHVDRKKKAFTKTENGSVEDDIVTGYTNHFSEY 1301
:|:||:.:.::|..|.||||||||..:|||:||||..|:|||||||||||
RBAM_008030__ 1300 KLTLRIENTKKAKQPGIYHVDRKKNVYTKTDNGSVSHDLVTGYTNHFSEY 1349
BSNT_01311___ 1302 TILNSGSNNKPPAFPSDQPTGGDDGSNGGGSDKPGGKQPTDGNGGNHTPP 1351
||||:.:.:.| ||: ||.|| ||||
RBAM_008030__ 1350 TILNANTKSAP------QPS-GDQGS---------GKQP----------- 1372
BSNT_01311___ 1352 GTDPTNGSGGNGSSGSGTDGPA-GGLLPDTATSMYSILLAGFLISALGTA 1400
||...|||...||.: |||||||||:||||||||.||||||||
RBAM_008030__ 1373 -------SGQKPSSGPAQDGVSPGGLLPDTATTMYSILLAGLLISALGTA 1415
BSNT_01311___ 1401 LYLYQRRKQSKANQA 1415
|||:||||..|.|:|
RBAM_008030__ 1416 LYLHQRRKAKKVNEA 1430
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.