Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01258 and RBAM_007910

See DNA alignment / Visit BSNT_01258 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_01258___yfmQ.1.9828.seq
#    -bsequence pep-align/RBAM_007910___yfmQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01258___yfmQ-RBAM_007910___yfmQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01258___yfmQ-RBAM_007910___yfmQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01258___yfmQ
# 2: RBAM_007910___yfmQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     101/149 (67.8%)
# Similarity:   128/149 (85.9%)
# Gaps:           3/149 ( 2.0%)
# Score: 558.0
# 
#
#=======================================

BSNT_01258___      1 MTW-AIVMLILMSLVKIVLTCLPTGVIEWLLGKFEVHAKLSGENASLSLD     49
                     ||| |:|.::::||:||||||||||.:||:|.|||.|:|||..:|::||.
RBAM_007910__      1 MTWIAVVSIVVISLIKIVLTCLPTGAVEWILRKFETHSKLSDASAAVSLG     50

BSNT_01258___     50 GKRLEGTEKQKVIDQFNEAVFLEKYYIYPGDEERYLHPENGGTPLVIDTK     99
                     ||||||.:|::|||.||||||:|::|||||||||||||:||..||||.|:
RBAM_007910__     51 GKRLEGEDKRRVIDDFNEAVFIERHYIYPGDEERYLHPQNGADPLVIKTR    100

BSNT_01258___    100 KGKKDVKLFVYRYDDHIDVVKQYKKKVIAYRVLSESLQKESLSVAGSLA    148
                     ||||||.:|||.|:||:|||||.||||:||.|||:||||.|::.|||  
RBAM_007910__    101 KGKKDVTVFVYSYEDHVDVVKQQKKKVVAYSVLSDSLQKRSMAAAGS--    147


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