Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01245 and RBAM_007540

See DNA alignment / Visit BSNT_01245 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence pep-align/BSNT_01245___yfnF.1.9828.seq
#    -bsequence pep-align/RBAM_007540___yfnF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01245___yfnF-RBAM_007540___yfnF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01245___yfnF-RBAM_007540___yfnF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01245___yfnF
# 2: RBAM_007540___yfnF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     234/303 (77.2%)
# Similarity:   268/303 (88.4%)
# Gaps:           0/303 ( 0.0%)
# Score: 1302.0
# 
#
#=======================================

BSNT_01245___      1 MTSAYCTVLSKGRLYQAVALFKSLELVDQDSPIFILCMDEDTHRVLQKLK     50
                     |||||||||||||||||:|||.||:.|..|:|||.||||:||:.|||.::
RBAM_007540__      1 MTSAYCTVLSKGRLYQAIALFGSLKAVQADAPIFTLCMDQDTYDVLQAMR     50

BSNT_01245___     51 MKQLNLVPVAALENELLLKLKETRDQSEYCWTMKPIFLQAVLNSNPGLER    100
                     ...:.|:.::|||||.||:||.||||||||||:||:||:.||:.:|.|||
RBAM_007540__     51 QDNVTLIQMSALENEELLELKRTRDQSEYCWTVKPVFLEFVLDGHPELER    100

BSNT_01245___    101 VTYIDGDLFFYADPSPIFENQPDCSVLLSRGDIVIPSFEKEQIDMLQRLL    150
                     |||||.||||:|||..||:|||||||||||||||||||||::||||||||
RBAM_007540__    101 VTYIDADLFFFADPRAIFDNQPDCSVLLSRGDIVIPSFEKQEIDMLQRLL    150

BSNT_01245___    151 GRYNSGFISFKHDDAGTDCLEWWKERCLEECKNAPGEGKFGDQGYLDYMS    200
                     |||||||:|||.|.||||||.|||||||||||||||||||||||||||||
RBAM_007540__    151 GRYNSGFLSFKTDSAGTDCLRWWKERCLEECKNAPGEGKFGDQGYLDYMS    200

BSNT_01245___    201 ELFPNVCDITTPGVNIGHWNYGQHTFSWKDGRIVLEDGSPLIFYHFSGYR    250
                     .|||||||||||||||||||||:|||||||||:|||||||||||||||||
RBAM_007540__    201 GLFPNVCDITTPGVNIGHWNYGRHTFSWKDGRLVLEDGSPLIFYHFSGYR    250

BSNT_01245___    251 IVSINEIKQIHETTRTDLPFVHELYQETLPHIIQHMQTLDPEFNGFASKD    300
                     ||:..:|:|||||.||||||||:|||:.|..:|..:..:.|||:||||:|
RBAM_007540__    251 IVTAGDIRQIHETDRTDLPFVHQLYQDILKRVIGTVSAVCPEFSGFASED    300

BSNT_01245___    301 DNK    303
                     |||
RBAM_007540__    301 DNK    303


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