Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01229 and RBAM_007330

See DNA alignment / Visit BSNT_01229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_01229___yezD.1.9828.seq
#    -bsequence pep-align/RBAM_007330___yezD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01229___yezD-RBAM_007330___yezD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01229___yezD-RBAM_007330___yezD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01229___yezD
# 2: RBAM_007330___yezD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 57
# Identity:      42/57 (73.7%)
# Similarity:    49/57 (86.0%)
# Gaps:           2/57 ( 3.5%)
# Score: 217.0
# 
#
#=======================================

BSNT_01229___      1 MVSKSTIDPEVIEKIISSLETLDFGTVQITVHDSQITQIEKIEKHRFSLK     50
                     |.||..:||.|||||||:||||||||||||||:||:|||:|:||:|||||
RBAM_007330__      1 MTSKGNVDPHVIEKIISALETLDFGTVQITVHNSQVTQIDKVEKYRFSLK     50

BSNT_01229___     51 RKESK--     55
                     .||.|  
RBAM_007330__     51 SKEVKQS     57


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