Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01227 and RBAM_007320

See DNA alignment / Visit BSNT_01227 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_01227.1.9828.seq
#    -bsequence pep-align/RBAM_007320___yetI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01227-RBAM_007320___yetI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01227-RBAM_007320___yetI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01227
# 2: RBAM_007320___yetI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     201/296 (67.9%)
# Similarity:   238/296 (80.4%)
# Gaps:           8/296 ( 2.7%)
# Score: 1031.0
# 
#
#=======================================

BSNT_01227         1 ------MNIDQLLYQYIIDNTADITEKWFSLRCQLKGELYSASHLSEETK     44
                           :|.||||:.|||.::|::||||..||.:|:|..|||..||||.|
RBAM_007320__      1 MKEETAVNKDQLLHDYIITHSAELTEKWLKLRRKLRGRFYSADQLSEEMK     50

BSNT_01227        45 TLLTEQHTFTNITIASAFLEDQTDFQDNMTKWAENVAKNRVEQDVQVHEV     94
                     .||.|||||||..||||||||...||.|..|||..|||:|||||.:||||
RBAM_007320__     51 QLLIEQHTFTNTVIASAFLEDPAVFQHNKEKWAAQVAKSRVEQDAEVHEV    100

BSNT_01227        95 VEAISNSRISFWDAVVTFIKENQEIVTNEDADRWNRIVNQSFDKLIIEFS    144
                     ||||.|||..||:||..|:.|:|:|||||||.|||.:||.|||:|:.:|:
RBAM_007320__    101 VEAIGNSRTVFWEAVTRFMDEHQDIVTNEDARRWNHLVNGSFDQLMTDFT    150

BSNT_01227       145 EQYQKFMLMRLTSQQELISELGCPVISIADGIGILPLIGSIDTKRAQVIL    194
                     ||:||.|:.||:|||||||||.||||.|||.||.|||||||||:||:|||
RBAM_007320__    151 EQFQKLMIARLSSQQELISELSCPVILIADTIGTLPLIGSIDTRRARVIL    200

BSNT_01227       195 ETVPVRCVERKITSLVVDLSGVPIVDTMVAQQLYNLSKTLFLLGVKAVFS    244
                     |:||..||.::||:||:|||||||||||||||||.|||||||||::.|||
RBAM_007320__    201 ESVPENCVAKRITNLVIDLSGVPIVDTMVAQQLYMLSKTLFLLGIRTVFS    250

BSNT_01227       245 GIRPDVAQTSIQLGLDFSEYETYGTLKQALENMGVRCIVEELEENK    290
                     ||||||||||||||||||||:|||:|:|||.:|||.|:.||.:.  
RBAM_007320__    251 GIRPDVAQTSIQLGLDFSEYQTYGSLEQALASMGVTCVFEEAKA--    294


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