Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01225 and RBAM_007310

See DNA alignment / Visit BSNT_01225 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_01225___yetH.1.9828.seq
#    -bsequence pep-align/RBAM_007310___yetH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01225___yetH-RBAM_007310___yetH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01225___yetH-RBAM_007310___yetH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01225___yetH
# 2: RBAM_007310___yetH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:      91/121 (75.2%)
# Similarity:   102/121 (84.3%)
# Gaps:           1/121 ( 0.8%)
# Score: 500.0
# 
#
#=======================================

BSNT_01225___      1 -MIKQIGTVAVYVEDQQKAKQFWTEKVGFDIAADHPMGPEASWLEVAPKG     49
                      |||:|.|||||.:||||||.|||||.||:..|:|||||.|.||||||||
RBAM_007310__      1 MMIKKIATVAVYTDDQQKAKTFWTEKAGFETVAEHPMGPGAFWLEVAPKG     50

BSNT_01225___     50 AETRLVIYPKAMMKGSEQMKASIVFECEDIFGTYEKMKTNGVEFLGEPNQ     99
                     |.|.||||||:||||:|.|||||||||||:|..||:||.||:.||.||.|
RBAM_007310__     51 ATTHLVIYPKSMMKGAEHMKASIVFECEDVFAAYEQMKKNGITFLDEPKQ    100

BSNT_01225___    100 MEWGTFVQFKDEDGNVFLLKE    120
                     ||||:|||||||||:|||||.
RBAM_007310__    101 MEWGSFVQFKDEDGHVFLLKS    121


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