Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06219 and RBAM_006190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:40
# Commandline: needle
# -asequence pep-align/BSNT_06219___yycB.1.9828.seq
# -bsequence pep-align/RBAM_006190___yycB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06219___yycB-RBAM_006190___yycB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06219___yycB-RBAM_006190___yycB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06219___yycB
# 2: RBAM_006190___yycB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity: 188/414 (45.4%)
# Similarity: 260/414 (62.8%)
# Gaps: 22/414 ( 5.3%)
# Score: 928.5
#
#
#=======================================
BSNT_06219___ 1 ---------MPHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRA 41
:.....||: ..|:.|:|.|..|||..:|||||::||||.
RBAM_006190__ 1 MKIKDEHQILQASQRKKL--ILLVIGVILIGANLRAPLTSVGPLVSSIRD 48
BSNT_06219___ 42 ELHMSNGAAGFLTALPLLSFAVLSPLAPKLGQRLGNERTLWLGLVILLIG 91
.|.|:|.|||.:|.:|||:||.|||..|.|.:|.|.|..|...|::|..|
RBAM_006190__ 49 SLGMTNAAAGTITTVPLLAFACLSPFVPLLSRRFGTEIVLLSSLIVLTAG 98
BSNT_06219___ 92 VLTRSTGYTAALFFGTALIGVGIAIGNVLLPSLIKHKYPEKPGIVISLYT 141
.|.||......|||||.|:|:.||:.|||||||||||:|...||:..:|:
RBAM_006190__ 99 TLLRSIAGIGTLFFGTILLGLSIAVCNVLLPSLIKHKFPGNLGIMTGVYS 148
BSNT_06219___ 142 TSMNIFAALASGVSVPLATQMDGGWKQAFLLWGGLALLALLIWIPQLRHR 191
.|||:..|:|||:|||:|:....|||.|...|..|:.:|.::||||:|.|
RBAM_006190__ 149 VSMNLCGAIASGISVPIASSAGLGWKGALGCWAILSFIAFVMWIPQMRGR 198
BSNT_06219___ 192 DTANQTMKL---QSSSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRS 238
:...:|... :.||:..|.:||.||:||||||.:||:.|||.||||:.
RBAM_006190__ 199 ELPVRTTGTNGEKKSSLLRSPLAWKVTMFMGLQSLIFYTVIAWLPEILQQ 248
BSNT_06219___ 239 HGIDTATAGWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIG 288
:|:.::.||||:|||||:.||.||:.|:.|.::|.||.:....|..:|||
RBAM_006190__ 249 NGLSSSKAGWMLSLMQFSVLPITFIVPIAAAKMKNQRALAGLTALFFLIG 298
BSNT_06219___ 289 LCGLLAGGSHTLLAIWMIIIGIGQGSSISLALTLIGLRSENAQQAAALSG 338
:.|:|. ||..|..:|:|:|||..|.:.|||:....||:.:..:||||||
RBAM_006190__ 299 IAGVLF-GSPALTPLWVILIGIAGGCAFSLAMMFFSLRTRHVHEAAALSG 347
BSNT_06219___ 339 MSQSFGYLLAAVGPIFVGYLFDQTHSWTMPIVLLIAALIVMGAAGQRAGR 388
|:|||||||||.||:..|.|.|.||.||:|:.:|||..:::...|..||:
RBAM_006190__ 348 MAQSFGYLLAAFGPLVFGLLHDITHGWTVPLFMLIAVSVLIFIFGVGAGK 397
BSNT_06219___ 389 DRYIFQSEKQRNSA 402
...|..:
RBAM_006190__ 398 AEQIKTA------- 404
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