Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00999 and RBAM_006160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence pep-align/BSNT_00999___ydhL.1.9828.seq
# -bsequence pep-align/RBAM_006160___ydhL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00999___ydhL-RBAM_006160___ydhL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00999___ydhL-RBAM_006160___ydhL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00999___ydhL
# 2: RBAM_006160___ydhL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 327/388 (84.3%)
# Similarity: 361/388 (93.0%)
# Gaps: 2/388 ( 0.5%)
# Score: 1660.0
#
#
#=======================================
BSNT_00999___ 1 MNFKVFLLAASTIAVGLVELIVGGILPQIANDLDISIVSAGQLISVFALG 50
||||||||||||||||||||||||||||||:|||||||||||||||||||
RBAM_006160__ 1 MNFKVFLLAASTIAVGLVELIVGGILPQIASDLDISIVSAGQLISVFALG 50
BSNT_00999___ 51 YAVSGPLLLALTARIERKRLYLIALFVFFLSNLIAYFSPNFATLMVSRVL 100
||||||||||:||:.|||||||||||:||||||:||||||||.|||||||
RBAM_006160__ 51 YAVSGPLLLAVTAKAERKRLYLIALFIFFLSNLVAYFSPNFAVLMVSRVL 100
BSNT_00999___ 101 AAMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPLGILI 150
|:|||||||||||||||||||||||||||||||||||||||||||:||:|
RBAM_006160__ 101 ASMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPVGIII 150
BSNT_00999___ 151 SDSFGWRILFLGIGLLALISMLIISIFFERIPAEKMIPFREQLKTIGNLK 200
|::|||||||||||:|:|:||||||:|||:||||||||||||:||||..|
RBAM_006160__ 151 SNAFGWRILFLGIGVLSLVSMLIISVFFEKIPAEKMIPFREQIKTIGTAK 200
BSNT_00999___ 201 IASSHLVTMFTLAGHYTLYAYFAPFLEETLHLSSFWVSICYFLFGISAVC 250
|||:||||:||||||||||||||||||.||||||.|||:||||||:||||
RBAM_006160__ 201 IASAHLVTLFTLAGHYTLYAYFAPFLERTLHLSSVWVSVCYFLFGLSAVC 250
BSNT_00999___ 251 GGPFGGALSDRLGSFKSILLVTGSFAIIMFLLPLSTSSMIFFLPVMVIWG 300
||||||.|.||||:||||:|||.|||:|:|:|||:|.|:|.|||.|||||
RBAM_006160__ 251 GGPFGGWLYDRLGAFKSIMLVTVSFALILFILPLTTVSLIIFLPAMVIWG 300
BSNT_00999___ 301 LLSWSLAPAQQSYLIEIAPDSSDIQQSFNTSALQVGIALGSAIGGVVLDQ 350
|||||||||||||||:|||:||||||||||||||:||||||||||.|:.|
RBAM_006160__ 301 LLSWSLAPAQQSYLIKIAPESSDIQQSFNTSALQIGIALGSAIGGGVIGQ 350
BSNT_00999___ 351 TGTVVSTAWCGGSIVIIAVLFAFISLTRPVQTAKKSSL 388
||:|.:||||||.||||||..|..|||||....|.:
RBAM_006160__ 351 TGSVTATAWCGGLIVIIAVALAVFSLTRPAWKTKSA-- 386
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