Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00997 and RBAM_006150
See
DNA alignment /
Visit
BSNT_00997 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence pep-align/BSNT_00997___ydhK.1.9828.seq
# -bsequence pep-align/RBAM_006150___ydhK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00997___ydhK-RBAM_006150___ydhK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00997___ydhK-RBAM_006150___ydhK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00997___ydhK
# 2: RBAM_006150___ydhK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity: 114/242 (47.1%)
# Similarity: 147/242 (60.7%)
# Gaps: 47/242 (19.4%)
# Score: 590.5
#
#
#=======================================
BSNT_00997___ 1 MFSLSAGKSYRKKMKQRR----MNMKISKYALGILMLSLVFVLSACGNNN 46
||.:: :.||...:...:.:|..|..|:.| |:.
RBAM_006150__ 1 -------------MKNQKGKGVLEMKARLFLFSMFLLIPVLALAGC-NSQ 36
BSNT_00997___ 47 STKESTHDNHSDSSTHEEMDHSGSADVPEGLQESKNPKYKVGSQVIINTS 96
|:..|......::.:||:|:||||::||:||::::||.|||||.|:|..|
RBAM_006150__ 37 SSGGSEKAKDKETHSHEDMNHSGSSEVPKGLKKAENPTYKVGSDVMILAS 86
BSNT_00997___ 97 HMKGMKGAEATVTGAYDTTAYVVSYTPTNGGQRVDHHKWVIQEEIKDAGD 146
||||||.|:.||.||||||.|.|||||..||:||:.||||||||:|.|||
RBAM_006150__ 87 HMKGMKNAQGTVKGAYDTTVYSVSYTPETGGKRVEDHKWVIQEELKGAGD 136
BSNT_00997___ 147 KTLQPGDQVILEASHMKGMKGATAEIDSAEKTTVYMVDYTSTTSGEKVKN 196
:||.|||:.::|||||||||||.|.||||:||||||||||.|..|:||.|
RBAM_006150__ 137 RTLNPGDKAVIEASHMKGMKGAEAVIDSAKKTTVYMVDYTPTDGGQKVTN 186
BSNT_00997___ 197 HKWVTEDELSAKS----------------------------- 209
||.||||||:|..
RBAM_006150__ 187 HKGVTEDELAAAKYKGRKSRRNSFGFYAVSHLCGFCFPGRSR 228
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.