Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00981 and RBAM_006000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence pep-align/BSNT_00981___ydgK.1.9828.seq
# -bsequence pep-align/RBAM_006000___ydgK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00981___ydgK-RBAM_006000___ydgK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00981___ydgK-RBAM_006000___ydgK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00981___ydgK
# 2: RBAM_006000___ydgK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 361/409 (88.3%)
# Similarity: 379/409 (92.7%)
# Gaps: 13/409 ( 3.2%)
# Score: 1791.0
#
#
#=======================================
BSNT_00981___ 1 MLHNPTGKERLALAFLLGMLAILGPLNIDMYLPSFPEIAEDLSASASLVQ 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_006000__ 1 MLHNPTGKERLALAFLLGMLAILGPLNIDMYLPSFPEIAEDLSARASLVQ 50
BSNT_00981___ 51 LSLTACLVGLTIGQLIVGPVSDAQGRRKPLLICIFLFALSSLFCALSPNI 100
|||||||:||||||::|||:|||:|||||||:|||||||.||||||:|||
RBAM_006000__ 51 LSLTACLIGLTIGQVVVGPLSDAKGRRKPLLLCIFLFALFSLFCALAPNI 100
BSNT_00981___ 101 TTLVAARFLQGFTASAGLVLSRAIVRDVFTGRELSKFFSLLMVITAVAPM 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_006000__ 101 TTLVIARFLQGFTASAGLVLSRAIVRDVFTGRELSKFFSLLMVITAVAPM 150
BSNT_00981___ 151 VAPMTGGAILLLPFATWHTIFHVLMIIGFLLVLLIALRLKETLPPEKRIP 200
|||||||||||||||:|||||..|..|||||||:|||:|.||||||||||
RBAM_006000__ 151 VAPMTGGAILLLPFASWHTIFLFLTFIGFLLVLIIALKLTETLPPEKRIP 200
BSNT_00981___ 201 SSIGTSVKTMGSLLKDRSFMGYALTVGFIHGGSFAYVSGTPFVYQDIYGV 250
||||.||:|||||||||||:||||||||||||||||||||||||||||||
RBAM_006000__ 201 SSIGNSVRTMGSLLKDRSFIGYALTVGFIHGGSFAYVSGTPFVYQDIYGV 250
BSNT_00981___ 251 SPQVFSILFGINGLAIISGSFIIGRFGGIIHEKSLLRIAVITAMIATAVL 300
||||||:||||||||||:||||||||||||||||||||.|||||.|||||
RBAM_006000__ 251 SPQVFSVLFGINGLAIITGSFIIGRFGGIIHEKSLLRIGVITAMTATAVL 300
BSNT_00981___ 301 LTMTMIHGPLATLVISIFIYMITIGMVLTSTFTLAMEKQGHRAGSASALL 350
|.||:||||||.||||||||||||||.|||||||||||||||||||||||
RBAM_006000__ 301 LVMTIIHGPLAALVISIFIYMITIGMTLTSTFTLAMEKQGHRAGSASALL 350
BSNT_00981___ 351 GMLPLLLGSIVSPLVGINETTAVPMGAIMFVTAVIGSLAFFGLT------ 394
||||||||||||||||:||.||||||||||.|:||||:|||.||
RBAM_006000__ 351 GMLPLLLGSIVSPLVGMNEATAVPMGAIMFTTSVIGSIAFFALTTKPEKA 400
BSNT_00981___ 395 -KERVGQNS 402
||
RBAM_006000__ 401 KKE------ 403
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