Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00896 and RBAM_005670

See DNA alignment / Visit BSNT_00896 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_00896.1.9828.seq
#    -bsequence pep-align/RBAM_005670___ydeH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00896-RBAM_005670___ydeH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00896-RBAM_005670___ydeH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00896
# 2: RBAM_005670___ydeH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      96/127 (75.6%)
# Similarity:   109/127 (85.8%)
# Gaps:           4/127 ( 3.1%)
# Score: 472.0
# 
#
#=======================================

BSNT_00896         1 MLKRFSLVFVTLMMSILVVLAAAKESPGDHVISFDEPLILMISIGIVVFL     50
                     |||||.|||:||:|||..|.|||:|||||.||||||||||:||:||::.|
RBAM_005670__      1 MLKRFFLVFLTLIMSIFAVFAAAEESPGDRVISFDEPLILLISLGIILCL     50

BSNT_00896        51 FIPPLVMSFFGNLVVRIISGVYQCFIVFTFLGLIPIGFLIPNGFLTILVS    100
                     ||||.||||||:|||||||||||||||.||.|||||||||||||||||.:
RBAM_005670__     51 FIPPFVMSFFGSLVVRIISGVYQCFIVLTFAGLIPIGFLIPNGFLTILAA    100

BSNT_00896       101 IAGTLVSIASVAVTLCIGKNKKDI---    124
                     :.|||||.|||||||.:|: ||:.   
RBAM_005670__    101 VLGTLVSSASVAVTLFVGR-KKEAGRF    126


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