Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05200 and RBAM_005490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence pep-align/BSNT_05200___racX.1.9828.seq
# -bsequence pep-align/RBAM_005490___racX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05200___racX-RBAM_005490___racX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05200___racX-RBAM_005490___racX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05200___racX
# 2: RBAM_005490___racX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 124/227 (54.6%)
# Similarity: 175/227 (77.1%)
# Gaps: 1/227 ( 0.4%)
# Score: 694.0
#
#
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BSNT_05200___ 1 MIGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYA 50
|||||||||||||.||:|||:|.|||:|||.:|:|:|||||||||||||.
RBAM_005490__ 1 MIGILAGMGPKSTGPFVDKVVDECQKIYGAIHDMDFPHMMIYSCPTPFYM 50
BSNT_05200___ 51 DRPIDHDEMKKAIIDGAVKLEKTDVDFIALPCNTAHVYYEEIQQALSVPM 100
::|:||.:|:||||:||||||||.|||||:||||||:|:.:|::::|||:
RBAM_005490__ 51 NKPLDHTDMEKAIIEGAVKLEKTGVDFIAIPCNTAHIYFNQIKKSISVPL 100
BSNT_05200___ 101 LHIVEETIKEIPHPAKKAVVLGTEPTIQSAIYQKVLEENGQEVVHKDHWQ 150
|::|:|||.:||..:|||.:|.|.||:||.|:|:.|...|.:.:|:..||
RBAM_005490__ 101 LNMVDETINKIPKGSKKAALLATVPTVQSGIFQEALNREGYDFLHQVSWQ 150
BSNT_05200___ 151 QAVNQLIAAIKQPNHMEYSQSLWQTLYEEISQHADIIISACTDLNAVLDH 200
..|:.:|..||| ..:..:.:|:..|:.|:::..|.:|.||||||.|.|.
RBAM_005490__ 151 IYVDHIIEKIKQ-GQINEAGTLYDELHRELAEKVDTVIIACTDLNMVTDQ 199
BSNT_05200___ 201 IQSEIPMIDSSACLAKSTVSTYLAYQS 227
..||:..:|||||||::.|:.|::...
RBAM_005490__ 200 KSSELTFVDSSACLAQAIVNKYVSLTK 226
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