Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00885 and RBAM_005410

See DNA alignment / Visit BSNT_00885 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_00885___ydeB.1.9828.seq
#    -bsequence pep-align/RBAM_005410___ydeB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00885___ydeB-RBAM_005410___ydeB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00885___ydeB-RBAM_005410___ydeB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00885___ydeB
# 2: RBAM_005410___ydeB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     142/158 (89.9%)
# Similarity:   148/158 (93.7%)
# Gaps:           5/158 ( 3.2%)
# Score: 720.0
# 
#
#=======================================

BSNT_00885___      1 MEVDDMFQIGDNIVYPMHGAGIIEAIEEKEFLEEKQQYYVIRMSISNMTV     50
                          ||||||||||||||||.|||||||:||||||||||||||||||||
RBAM_005410__      1 -----MFQIGDNIVYPMHGAGTIEAIEEKQFLEEKQQYYVIRMSISNMTV     45

BSNT_00885___     51 MIPTSKILSSNIRPVTDILALKHIMHIFQHGESDRLLPWKQRYKINTDKI    100
                     ||||.|||||||||||||.|||||:|||||||||:||||||||.:||:||
RBAM_005410__     46 MIPTRKILSSNIRPVTDIRALKHIIHIFQHGESDKLLPWKQRYIVNTNKI     95

BSNT_00885___    101 KTGEIQEGAEVVRDLMRMKKEKALNASEKKMLDNAYEFLISELEVIKGIT    150
                     |||||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_005410__     96 KTGEIQEGAEVVRDLMRMKKEKALNSSEKKMLDNAYEFLISELEVIKGIT    145

BSNT_00885___    151 EKQIKSFG    158
                     |||||||.
RBAM_005410__    146 EKQIKSFC    153


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