Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00884 and RBAM_005400

See DNA alignment / Visit BSNT_00884 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_00884___cspC.1.9828.seq
#    -bsequence pep-align/RBAM_005400___cspC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00884___cspC-RBAM_005400___cspC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00884___cspC-RBAM_005400___cspC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00884___cspC
# 2: RBAM_005400___cspC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      64/67 (95.5%)
# Similarity:    65/67 (97.0%)
# Gaps:           1/67 ( 1.5%)
# Score: 335.0
# 
#
#=======================================

BSNT_00884___      1 MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQSDGFKSLDEGQKVSFD     50
                     |||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_005400__      1 MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQSDGFKSLDEGQKVTFD     50

BSNT_00884___     51 VEQGARGAQAANVQKA-     66
                     |||||||||||||||. 
RBAM_005400__     51 VEQGARGAQAANVQKTA     67


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