Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00774 and RBAM_004840

See DNA alignment / Visit BSNT_00774 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_00774___ydbL.1.9828.seq
#    -bsequence pep-align/RBAM_004840___ydbL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00774___ydbL-RBAM_004840___ydbL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00774___ydbL-RBAM_004840___ydbL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00774___ydbL
# 2: RBAM_004840___ydbL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 111
# Identity:     100/111 (90.1%)
# Similarity:   105/111 (94.6%)
# Gaps:           0/111 ( 0.0%)
# Score: 517.0
# 
#
#=======================================

BSNT_00774___      1 MRNFITALPIVLLLGFSFVSFMFQFEHLVYFRLALGLFSLVGLYMIYKMK     50
                     |||||||||||||||||||||||||||||||||||||||.|||:::||||
RBAM_004840__      1 MRNFITALPIVLLLGFSFVSFMFQFEHLVYFRLALGLFSTVGLFLLYKMK     50

BSNT_00774___     51 TGIRYFIIYLYASWIVLAAVTAFEEPIFSSFFFGGLVMTMGYLTYMLIYL    100
                     :|.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_004840__     51 SGFRYFIIYLYASWIVLAAVTAFEEPIFSSFFFGGLVMTMGYLTYMLIYL    100

BSNT_00774___    101 GMKQDRDANPV    111
                     |:||||....|
RBAM_004840__    101 GLKQDRGPEAV    111


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