Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00757 and RBAM_004720

See DNA alignment / Visit BSNT_00757 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_00757___ydbA.1.9828.seq
#    -bsequence pep-align/RBAM_004720___ydbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00757___ydbA-RBAM_004720___ydbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00757___ydbA-RBAM_004720___ydbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00757___ydbA
# 2: RBAM_004720___ydbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     188/273 (68.9%)
# Similarity:   227/273 (83.2%)
# Gaps:           6/273 ( 2.2%)
# Score: 986.0
# 
#
#=======================================

BSNT_00757___      1 MPTERKEDLHQQLKEIEKWEKDQQKVWFWEKLSRLPFQLLDKLTPEFIQK     50
                      .||.:.||.:||::|:||||.||:|.||:..:||||||||||||:|||:
RBAM_004720__      1 -MTEERTDLERQLRDIQKWEKAQQRVMFWQTFTRLPFQLLDKLTPQFIQR     49

BSNT_00757___     51 KIGKLLDEVGSFVQTGGQYLTSEKQIIRMFQKKLPEEIFESLEDIRKAPL    100
                     |||.:|||.|:|:|:|||||||||:|::.|||:||....::|.|||.|||
RBAM_004720__     50 KIGLILDETGTFIQSGGQYLTSEKRIMKKFQKRLPHGTCQTLHDIRNAPL     99

BSNT_00757___    101 PVMDEIAEGMGKNRTNAATVQGATTGVGGVFTLAADIPAVLGLSLKTLQD    150
                     .|||||||.:.:....|||||||.|||||||||||||||:||||||||||
RBAM_004720__    100 AVMDEIAEAIARTSVKAATVQGAATGVGGVFTLAADIPAMLGLSLKTLQD    149

BSNT_00757___    151 IAVAYGYDPKEKKERVFIVKCLQLTSADVVGKRSILQELKHYDQ-DRTYK    199
                     ||||||:|||:|||||||||.|||.|:||:||::|||:|:.||| ||.|:
RBAM_004720__    150 IAVAYGFDPKDKKERVFIVKLLQLASSDVIGKKAILQDLRQYDQNDRAYQ    199

BSNT_00757___    200 NVASQIQGWREVVLGYRDTFGWKKLFQMVPVAGMVFGAAANRSTLNDITE    249
                     .||||||||||||..|||||..|||.||||.||::|||:||||.|..|.|
RBAM_004720__    200 RVASQIQGWREVVYSYRDTFAAKKLLQMVPAAGIIFGASANRSALESIAE    249

BSNT_00757___    250 TGMMLYKKRRILERLKETEREME    272
                     ||:|||||||||:|:|:||    
RBAM_004720__    250 TGIMLYKKRRILKRMKDTE----    268


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