Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00737 and RBAM_004440

See DNA alignment / Visit BSNT_00737 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_00737___ydaG.1.9828.seq
#    -bsequence pep-align/RBAM_004440___ydaG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00737___ydaG-RBAM_004440___ydaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00737___ydaG-RBAM_004440___ydaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00737___ydaG
# 2: RBAM_004440___ydaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     120/140 (85.7%)
# Similarity:   133/140 (95.0%)
# Gaps:           0/140 ( 0.0%)
# Score: 661.0
# 
#
#=======================================

BSNT_00737___      1 MNQQDIKQKVLDVLDHHKVGSLATVQKGKPNSRYMTFFHDGLTIYTPTSK     50
                     |||.:||:|||:|||||||||||||::|||:|||||||||||||||||||
RBAM_004440__      1 MNQNEIKEKVLEVLDHHKVGSLATVEQGKPHSRYMTFFHDGLTIYTPTSK     50

BSNT_00737___     51 ETHKAEEIENNPNVHILLGYDCEGFGDAYVEVAGKAKINNSAELKDKIWS    100
                     :|||||||||||||||||||||||||||||||||.||:||||:||:|:|.
RBAM_004440__     51 DTHKAEEIENNPNVHILLGYDCEGFGDAYVEVAGTAKLNNSADLKEKLWD    100

BSNT_00737___    101 SKLERWFDGKDDPNLVILEIEPEDIRLMNAGEKTPVSLEL    140
                     .|||||||||||||||||||||:.|:|||||||||..|||
RBAM_004440__    101 PKLERWFDGKDDPNLVILEIEPKQIKLMNAGEKTPAELEL    140


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