Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00735 and RBAM_004420

See DNA alignment / Visit BSNT_00735 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_00735___ydaE.1.9828.seq
#    -bsequence pep-align/RBAM_004420___ydaE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00735___ydaE-RBAM_004420___ydaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00735___ydaE-RBAM_004420___ydaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00735___ydaE
# 2: RBAM_004420___ydaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     137/167 (82.0%)
# Similarity:   152/167 (91.0%)
# Gaps:           0/167 ( 0.0%)
# Score: 767.0
# 
#
#=======================================

BSNT_00735___      1 MGITKEEVNSYYQKAGIVLTDEEVDQIQLMDYGLGKERKVGLQLFVYVNT     50
                     |.|:|.:||:|||||||||||.||:.||:|||||||..:.|||||:||||
RBAM_004420__      1 MTISKHDVNAYYQKAGIVLTDNEVEDIQIMDYGLGKLEETGLQLFIYVNT     50

BSNT_00735___     51 DRYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKT    100
                     ||||||||||||.|||||||||||..::|||||||||:||||||||||||
RBAM_004420__     51 DRYCSKELVLFPRQTCPEHRHPPVGSEKGKQETFRCRWGKVYLYVEGEKT    100

BSNT_00735___    101 PLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGEEGAVVTE    150
                     ..|.||||:||:|:|||||||.|||||||||||:||||||||||||||||
RBAM_004420__    101 ENPSVLPPEEDKEYYTVWHEIVLEPGGQYTIPPDTKHWFQAGEEGAVVTE    150

BSNT_00735___    151 MSSTSTDKHDIFTDPRI    167
                     |||||||.||:||||||
RBAM_004420__    151 MSSTSTDDHDVFTDPRI    167


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