Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00690 and RBAM_004180

See DNA alignment / Visit BSNT_00690 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:27
# Commandline: needle
#    -asequence pep-align/BSNT_00690___gdh.1.9828.seq
#    -bsequence pep-align/RBAM_004180___gdh.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00690___gdh-RBAM_004180___gdh.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00690___gdh-RBAM_004180___gdh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00690___gdh
# 2: RBAM_004180___gdh
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     237/261 (90.8%)
# Similarity:   251/261 (96.2%)
# Gaps:           0/261 ( 0.0%)
# Score: 1235.0
# 
#
#=======================================

BSNT_00690___      1 MYPDLKGKVVAITGAASGLGKAMAIRFGKEQAKVVINYYSNKQDPNEVKE     50
                     ||.||||||||||||:||||||||||||:||||||:|||||::|...|||
RBAM_004180__      1 MYTDLKGKVVAITGASSGLGKAMAIRFGQEQAKVVVNYYSNEKDAQTVKE     50

BSNT_00690___     51 EVIKAGGEAVVVQGDVTKEEDVKNIVQTAIKEFGTLDIMINNAGLENPVP    100
                     |:.|||||||:||||||||||||||||||:|||||||:||||||:||||.
RBAM_004180__     51 EIQKAGGEAVIVQGDVTKEEDVKNIVQTAVKEFGTLDVMINNAGMENPVQ    100

BSNT_00690___    101 SHEMPLKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVI    150
                     |||||||||:|||.||||||||||||||||:|||||:|||||||||||:|
RBAM_004180__    101 SHEMPLKDWNKVINTNLTGAFLGSREAIKYYVENDIQGNVINMSSVHEMI    150

BSNT_00690___    151 PWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
RBAM_004180__    151 PWPLFVHYAASKGGIKLMTETLALEYAPKRIRVNNIGPGAINTPINAEKF    200

BSNT_00690___    201 ADPKQKADVESMIPMGYIGEPEEIAAVAVWLASKESSYVTGITLFADGGM    250
                     |||.||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_004180__    201 ADPVQKKDVESMIPMGYIGEPEEIAAVAVWLASKESSYVTGITLFADGGM    250

BSNT_00690___    251 TKYPSFQAGRG    261
                     |||||||||||
RBAM_004180__    251 TKYPSFQAGRG    261


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