Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00683 and RBAM_004130

See DNA alignment / Visit BSNT_00683 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_00683___yczG.1.9828.seq
#    -bsequence pep-align/RBAM_004130___yczG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00683___yczG-RBAM_004130___yczG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00683___yczG-RBAM_004130___yczG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00683___yczG
# 2: RBAM_004130___yczG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      87/104 (83.7%)
# Similarity:    94/104 (90.4%)
# Gaps:           0/104 ( 0.0%)
# Score: 457.0
# 
#
#=======================================

BSNT_00683___      1 MNIPNHPETETLQLTKVLHALSDPLRLELVKQLAEAKEKTCSTCADVQVA     50
                     ||||||||||.||||||||||||||||||||||||..||||.|||||:||
RBAM_004130__      1 MNIPNHPETERLQLTKVLHALSDPLRLELVKQLAETTEKTCGTCADVRVA     50

BSNT_00683___     51 KSTLSHHFKVLRESGIAQVRIEGKRRYYSLRAEDLEKAFPGLLEAVLNVD    100
                     |||||||||||||:|||||||:||.||||||.:||:.||||||||:|..:
RBAM_004130__     51 KSTLSHHFKVLREAGIAQVRIDGKHRYYSLRKDDLQAAFPGLLEAILQTE    100

BSNT_00683___    101 QDRW    104
                     .|||
RBAM_004130__    101 PDRW    104


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