Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00675 and RBAM_004060

See DNA alignment / Visit BSNT_00675 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_00675___yclO.1.9828.seq
#    -bsequence pep-align/RBAM_004060___yclO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00675___yclO-RBAM_004060___yclO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00675___yclO-RBAM_004060___yclO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00675___yclO
# 2: RBAM_004060___yclO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     267/315 (84.8%)
# Similarity:   294/315 (93.3%)
# Gaps:           0/315 ( 0.0%)
# Score: 1371.0
# 
#
#=======================================

BSNT_00675___      1 MRNQMKIALLVVLAIVCIGLFLFYDLGNWDYTLPRRIKKVAAIVLTGGAI     50
                     |.:..||.||..||::|||.||||.||||:|:||||..||.|::||||||
RBAM_004060__      1 MSHNKKITLLAALAMICIGFFLFYGLGNWEYSLPRRCFKVLAMMLTGGAI     50

BSNT_00675___     51 AFSTMIFQTITNNRILTPSILGLDSLYMLIQTGIIFLFGSANMVIMNKNI    100
                     ||||:|||||||||||||.|||||||||||||.|:|||||.|:|:||||:
RBAM_004060__     51 AFSTVIFQTITNNRILTPGILGLDSLYMLIQTVIVFLFGSMNIVMMNKNL    100

BSNT_00675___    101 NFIISVLLMILFSLVLYQIMFKGEGRNIFFLLLIGIVFGTLFSSLSSFMQ    150
                     ||:|||.||:|.||||||:||||||||:|||||:|:||||||:|||||||
RBAM_004060__    101 NFVISVGLMVLLSLVLYQLMFKGEGRNVFFLLLVGVVFGTLFNSLSSFMQ    150

BSNT_00675___    151 MLIDPNEFQVVQDKMFASFNNINTDLLWLAFIIFLLTGVYVWRFTKFFDV    200
                     |||||||||||||||||||||||||||..|..:|||||:||||||:||||
RBAM_004060__    151 MLIDPNEFQVVQDKMFASFNNINTDLLGFAGAVFLLTGIYVWRFTRFFDV    200

BSNT_00675___    201 LSLGREHAVNLGIDYDKVVKQMLIVVAILVSVSTALVGPIMFLGLLVVNL    250
                     |||||||||||||||||:||||||||||||||||||||||||||||||||
RBAM_004060__    201 LSLGREHAVNLGIDYDKLVKQMLIVVAILVSVSTALVGPIMFLGLLVVNL    250

BSNT_00675___    251 AREFLKTYKHSYLIAGSVFISIIALVGGQFVVEKVFTFSTTLSVIINFAG    300
                     :|||||||:|:|||||||.|||:|||||||||||||||||||||||||||
RBAM_004060__    251 SREFLKTYRHTYLIAGSVLISIVALVGGQFVVEKVFTFSTTLSVIINFAG    300

BSNT_00675___    301 GIYFIYLLLKENKSW    315
                     |||||||||||||||
RBAM_004060__    301 GIYFIYLLLKENKSW    315


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