Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00656 and RBAM_003850

See DNA alignment / Visit BSNT_00656 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_00656___yclG.1.9828.seq
#    -bsequence pep-align/RBAM_003850___yclG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00656___yclG-RBAM_003850___yclG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00656___yclG-RBAM_003850___yclG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00656___yclG
# 2: RBAM_003850___yclG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 584
# Identity:     389/584 (66.6%)
# Similarity:   482/584 (82.5%)
# Gaps:           3/584 ( 0.5%)
# Score: 2110.0
# 
#
#=======================================

BSNT_00656___      1 MAEFILNAADFGVPGDGKTDSTERINQCLSTAVSKGYHTVWFPKGTYLID     50
                     |...||:..|.||..|||||.|..|||||:.|||:|.|||:||.|||.|:
RBAM_003850__      1 MPNRILDITDCGVAADGKTDVTGAINQCLAKAVSEGNHTVFFPPGTYKIN     50

BSNT_00656___     51 ATLGGDLNQRFRNAGIIVPGNLEIMMDPECIMKVIPNSSWGYSAFYVGKQ    100
                     .|||||.:|.||||||.||.:|.|::||||.:||.|||||||||||:|::
RBAM_003850__     51 GTLGGDSSQPFRNAGINVPSHLTIVLDPECTIKVAPNSSWGYSAFYIGRR    100

BSNT_00656___    101 ENITISGGQIIGERDEHTYVSAGIRSTHEWGFGICIEGCSNVLIDDVKIS    150
                     ||:||:||:||||||||||.:..:||||||||||||||.|||||::||||
RBAM_003850__    101 ENVTITGGRIIGERDEHTYTNVPLRSTHEWGFGICIEGSSNVLIENVKIS    150

BSNT_00656___    151 DFTGDGIIVSPRGLKTNQDYRTSEQIIIRRCEVRRSRRNNISITGCDMVT    200
                     |||||||||||.|||||.||.||||:.:||||:|:|||||||||||:.||
RBAM_003850__    151 DFTGDGIIVSPLGLKTNSDYETSEQVTLRRCEIRQSRRNNISITGCNTVT    200

BSNT_00656___    201 VEECLIEDAGTGNGTAPKFGIDIEGYGEGDVDYEEPINVSIRNNHFVGNV    250
                     ||||:|||||.|||||||||||||.|||||:||||.:::::|||.|.||.
RBAM_003850__    201 VEECVIEDAGQGNGTAPKFGIDIESYGEGDIDYEEALHITVRNNFFSGNA    250

BSNT_00656___    251 SSSVTNFNGYGILIEGNHSDNTISYGYGTQTVIKGNILRRPEDAAAAPRV    300
                     :|||||||||.:||||||||||||||||..|||.||:..|.:..:   |.
RBAM_003850__    251 ASSVTNFNGYNVLIEGNHSDNTISYGYGAHTVISGNVFFRSDGGS---RT    297

BSNT_00656___    301 GITGLGVSQGKETSDAVIAGNLITGFSTGIDVRGKSVLVTNNKISNFENT    350
                     .:.|.|||||:::|:|||:.|:||||||||||||||||||:||||.||||
RBAM_003850__    298 AVAGQGVSQGQDSSNAVISNNMITGFSTGIDVRGKSVLVTHNKISQFENT    347

BSNT_00656___    351 GILVYQSSDVKVDGNQIQNGLSETRRSIGLRAVLSDDIAFLNNCLIQVVD    400
                     ||.|||:.||.||||.|:||.||||||.|:||.||::..|:||.|.||.|
RBAM_003850__    348 GISVYQAEDVTVDGNVIENGRSETRRSTGMRATLSENAVFMNNTLNQVTD    397

BSNT_00656___    401 GVNVSGGNMIIKDNLLRKFSRGIWIAQGNAVIEGNILNPDAFEAVPESYS    450
                     |:::|.||:.:|.|:|..||||||:..||||||||.|.|:|::...|||:
RBAM_003850__    398 GISMSAGNITVKQNVLTSFSRGIWVTGGNAVIEGNTLIPNAYQGAAESYA    447

BSNT_00656___    451 VSVTNNAGAIIKNNTFKEFKNYPIYCSTSAKTSIIGNHLERSPLLVTIYI    500
                     |||||:|.|:||.|.||.:|||||:.|||:.||:|.|..|.|||:||:|:
RBAM_003850__    448 VSVTNDARAVIKGNLFKSYKNYPIFSSTSSGTSVISNRFESSPLIVTVYL    497

BSNT_00656___    501 SAGVHEIFDNTISVNRTAGNPIVIYINGSAGSIVSGNTINNLSADTATAI    550
                     ::|.||:.|||:::|||||:||.||:||::.|:|||||||||||.:|:||
RBAM_003850__    498 NSGTHEVIDNTLTINRTAGSPIGIYLNGTSNSLVSGNTINNLSAASASAI    547

BSNT_00656___    551 QTTTSTNSKIIGNRIFKGTINKHSSDTIDGNMIV    584
                     ||.:|.::|||||||.:|.|.||::||..||:::
RBAM_003850__    548 QTNSSASTKIIGNRIIRGVIVKHATDTDSGNIVI    581


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00656 and RBAM_003850

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
