Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00640 and RBAM_003770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence pep-align/BSNT_00640___yckJ.1.9828.seq
# -bsequence pep-align/RBAM_003770___yckJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00640___yckJ-RBAM_003770___yckJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00640___yckJ-RBAM_003770___yckJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00640___yckJ
# 2: RBAM_003770___yckJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity: 210/234 (89.7%)
# Similarity: 222/234 (94.9%)
# Gaps: 5/234 ( 2.1%)
# Score: 1077.0
#
#
#=======================================
BSNT_00640___ 1 MFLNNLPALTLGTAIPWDLVQQSFWPILSGGIYYTIPLTILSFIFGMILA 50
:|...:.||||||||||||||||||||||:|||||||||||||:|
RBAM_003770__ 1 -----MPEPVIATAIPWDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIA 45
BSNT_00640___ 51 LITALARMSKVRPLRWVFSVYVSAIRGTPLLVQLFIIFYLFPAFNVTLDP 100
|||||||||.::||||||||||||:|||||||||||||||||.||:||||
RBAM_003770__ 46 LITALARMSNMKPLRWVFSVYVSAVRGTPLLVQLFIIFYLFPTFNITLDP 95
BSNT_00640___ 101 FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKTLFRVI 150
||||||||||||||||||||||||.||||||||||||||||::|||||||
RBAM_003770__ 96 FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKTLFRVI 145
BSNT_00640___ 151 LPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQIL 200
|||||||||||||||||||||||||||||||||||||||||||:||||||
RBAM_003770__ 146 LPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQIL 195
BSNT_00640___ 201 VIYIEAAFIYWIICFLLSLVQHVIERRLDRYVAK 234
||||||||||||||||||:|||||||||||||||
RBAM_003770__ 196 VIYIEAAFIYWIICFLLSIVQHVIERRLDRYVAK 229
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