Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00639 and RBAM_003760

See DNA alignment / Visit BSNT_00639 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_00639___yckI.1.9828.seq
#    -bsequence pep-align/RBAM_003760___yckI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00639___yckI-RBAM_003760___yckI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00639___yckI-RBAM_003760___yckI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00639___yckI
# 2: RBAM_003760___yckI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     236/247 (95.5%)
# Similarity:   246/247 (99.6%)
# Gaps:           0/247 ( 0.0%)
# Score: 1205.0
# 
#
#=======================================

BSNT_00639___      1 MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNAL     50
                     ||:|||||||||:|||||||||:||||||||:||||||||||||||||||
RBAM_003760__      1 MLSVKGLNKSFGQNEILKKIDMEIEKGKVIAVLGPSGSGKTTLLRCLNAL     50

BSNT_00639___     51 EIPNRGELAFDDFSIDFSKKVKQADILKLRRKSGMVFQAYHLFPHRTALE    100
                     ||||||||||.||||||||||||||||:||||||||||||||||||||||
RBAM_003760__     51 EIPNRGELAFSDFSIDFSKKVKQADILRLRRKSGMVFQAYHLFPHRTALE    100

BSNT_00639___    101 NVMEGPVQVQKRNKEEVRKEAIQLLDKVGLKDKMDLYPFQLSGGQQQRVG    150
                     ||||||||||||:||:|||||::||:||||||||||||||||||||||||
RBAM_003760__    101 NVMEGPVQVQKRDKEQVRKEAMELLEKVGLKDKMDLYPFQLSGGQQQRVG    150

BSNT_00639___    151 IARALAIQPELMLFDEPTSALDPELVGEVLKVIKDLANEGWTMVVVTHEI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_003760__    151 IARALAIQPELMLFDEPTSALDPELVGEVLKVIKDLANEGWTMVVVTHEI    200

BSNT_00639___    201 KFAQEVADEVIFIDGGVIVEQGPPEQIFSAPKEERTQRFLNRILNPL    247
                     |||||||||||||||||||||||||||||||||||||||||||||||
RBAM_003760__    201 KFAQEVADEVIFIDGGVIVEQGPPEQIFSAPKEERTQRFLNRILNPL    247


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