Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00631 and RBAM_003720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence pep-align/BSNT_00631___ycxC.1.9828.seq
# -bsequence pep-align/RBAM_003720___ycxC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00631___ycxC-RBAM_003720___ycxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00631___ycxC-RBAM_003720___ycxC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00631___ycxC
# 2: RBAM_003720___ycxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity: 223/320 (69.7%)
# Similarity: 266/320 (83.1%)
# Gaps: 8/320 ( 2.5%)
# Score: 1139.5
#
#
#=======================================
BSNT_00631___ 1 -MVKHQQAPAYIAAILYSFIIGLSFLFVKIALQTAEPFDILAHRFTIAFA 49
:.:::.|.||:||||.:.|||.||:||||||::|.||||||||||.||.
RBAM_003720__ 1 MINQNRLAAAYLAAILNALIIGFSFIFVKIALRSANPFDILAHRFTAAFI 50
BSNT_00631___ 50 AATVPILFGWVKLSIRVKDVIAILPLALLYPALFFSFQAFGLVYSSSSEA 99
.|.:|:||||:|||:..|:|:|||||||||||||||||||||:|||||||
RBAM_003720__ 51 CAMLPVLFGWIKLSVSWKNVLAILPLALLYPALFFSFQAFGLLYSSSSEA 100
BSNT_00631___ 100 GIIQAAIPIFTMVFAAYVLKERPTWTQKGFTVLSVAGVMFIFVMKGVDVE 149
||||||||||||:|::|.|||||||.|||||.||||||:|||.||||..|
RBAM_003720__ 101 GIIQAAIPIFTMLFSSYFLKERPTWAQKGFTCLSVAGVVFIFTMKGVSAE 150
BSNT_00631___ 150 SASLKGSLLILLSALSSAMYNTAARKMTQRFKLTELTYIMSAIGFVVFNA 199
|||.||:.||||||||||:||||||:||.||.|.|||:.||||||..||.
RBAM_003720__ 151 SASFKGAFLILLSALSSALYNTAARRMTLRFSLGELTWCMSAIGFASFNC 200
BSNT_00631___ 200 IALVRHGAAGTVGTYFLPFREPGFVLAIVYLGVLSSLVTSFLSNYTLSRI 249
|||.||||.||:|.||||||:|||:.||:|||:||||:||.:|||.||:|
RBAM_003720__ 201 IALFRHGAEGTIGQYFLPFRDPGFIAAILYLGILSSLITSLMSNYALSKI 250
BSNT_00631___ 250 EAFKMSAFNHVSTIVTMIAGVMILNESLAWYHLAGAVCIMIGVVGSNINL 299
|||||||||::|.||||:|||::|:|||.|||:||||||:|||:|||.:.
RBAM_003720__ 251 EAFKMSAFNNLSVIVTMLAGVLVLHESLRWYHIAGAVCIVIGVLGSNASG 300
BSNT_00631___ 300 EKKTK----RPGMPAKK--- 312
.:|.. |..|...|
RBAM_003720__ 301 RRKKSILRHREKMKGNKDGI 320
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