Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00581 and RBAM_003510

See DNA alignment / Visit BSNT_00581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence pep-align/BSNT_00581___nasD.1.9828.seq
#    -bsequence pep-align/RBAM_003510___nasD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00581___nasD-RBAM_003510___nasD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00581___nasD-RBAM_003510___nasD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00581___nasD
# 2: RBAM_003510___nasD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 805
# Identity:     761/805 (94.5%)
# Similarity:   788/805 (97.9%)
# Gaps:           0/805 ( 0.0%)
# Score: 3966.0
# 
#
#=======================================

BSNT_00581___      1 MGKKQLVLVGNGMAGVRAIEEILSVAKDEFQITIFGAEPHPNYNRILLSK     50
                     |||||||||||||||||||||||.|:||||:|||||||||||||||||||
RBAM_003510__      1 MGKKQLVLVGNGMAGVRAIEEILRVSKDEFEITIFGAEPHPNYNRILLSK     50

BSNT_00581___     51 VLQGDTDIKDITLNDWDWYEENNIQLYTNETVIKVDTENKTVITDADRIQ    100
                     ||||||||:|||||||:||:||||||||.|||||||||||||||||||||
RBAM_003510__     51 VLQGDTDIQDITLNDWNWYKENNIQLYTGETVIKVDTENKTVITDADRIQ    100

BSNT_00581___    101 PYDELILATGSLPFILPIPGADKKGVTAFRDIKDTDTMLTASKQYKKAAV    150
                     |||||||||||:|||||||||||:|||||||||||||||.||||||||||
RBAM_003510__    101 PYDELILATGSVPFILPIPGADKQGVTAFRDIKDTDTMLAASKQYKKAAV    150

BSNT_00581___    151 IGGGLLGLEAARGLLNLGMDVSVIHLAPFLMERQLDATAGRLLQNELEKQ    200
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_003510__    151 IGGGLLGLEAARGLLNLGMDVSVIHLAPFLMERQLDAAAGRLLQNELEKQ    200

BSNT_00581___    201 GMTFLLEKQTEEIVGDDRVEGLRFKDGTSIEADLVVMAVGIRPNTTLGAE    250
                     ||||.||||||||:|.|||||:|||||||||||||||||||||||.||.|
RBAM_003510__    201 GMTFFLEKQTEEILGTDRVEGVRFKDGTSIEADLVVMAVGIRPNTQLGTE    250

BSNT_00581___    251 SGIPVNRGIIVNDYMQTEIPHIYAVGECAEHRGIAYGLVAPLYEQAKVLA    300
                     |||||||||||||||||:||||||||||||||||||||||||||||||||
RBAM_003510__    251 SGIPVNRGIIVNDYMQTDIPHIYAVGECAEHRGIAYGLVAPLYEQAKVLA    300

BSNT_00581___    301 KHICGIETNPYEGSVLSTQLKVSGVEVFSAGDFDESEDKKAIKVFDEQDG    350
                     ||:|||||.||||||||||||||||||||||||:||||||||||||||||
RBAM_003510__    301 KHLCGIETKPYEGSVLSTQLKVSGVEVFSAGDFNESEDKKAIKVFDEQDG    350

BSNT_00581___    351 IYKKIVLRDNKIVGAVLFGDSSEGNRLFSMIQKEADISETSKISILQPLN    400
                     ||||||||.|:|||||||||||||:||||||||||||||||||||||||:
RBAM_003510__    351 IYKKIVLRGNQIVGAVLFGDSSEGSRLFSMIQKEADISETSKISILQPLD    400

BSNT_00581___    401 QEAGTSITAAMSDDEIICGCNGVSKGAIIQAIQEKGCSSTDEIKACTGAS    450
                     ||||.|:||||||||||||||||||||||||||||||:||||||||||||
RBAM_003510__    401 QEAGASMTAAMSDDEIICGCNGVSKGAIIQAIQEKGCTSTDEIKACTGAS    450

BSNT_00581___    451 RSCGGCKPLVEEILQHTLGSDFDASAQKEAICGCTTLSRDEVVEEIKAKG    500
                     |||||||||||:|||:||||:||||||||||||||:||||||||||||||
RBAM_003510__    451 RSCGGCKPLVEDILQYTLGSEFDASAQKEAICGCTSLSRDEVVEEIKAKG    500

BSNT_00581___    501 LSHTREVMNVLGWKTPEGCSKCRPALNYYLGMINPTKYEDDRTSRFVNER    550
                     ||||||:||||||||||||||||||||||||||||..|||||||||||||
RBAM_003510__    501 LSHTREIMNVLGWKTPEGCSKCRPALNYYLGMINPATYEDDRTSRFVNER    550

BSNT_00581___    551 MHANIQKDGTYSVVPRMYGGVTNSTDLRKIADVVDKYEIPLVKMTGGQRI    600
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_003510__    551 MHANIQKDGTYSVVPRMYGGVTNSQDLRKIADVVDKYEIPLVKMTGGQRI    600

BSNT_00581___    601 DLIGVKKEDLPKVWEDLDMPSGYAYGKTLRTVKTCVGEQFCRFGTQDSMA    650
                     ||||||||||||||.:||||||||||||||||||||||||||||||||||
RBAM_003510__    601 DLIGVKKEDLPKVWAELDMPSGYAYGKTLRTVKTCVGEQFCRFGTQDSMA    650

BSNT_00581___    651 LGIALEKKFEGLNTPHKVKMAVSACPRNCAESGIKDLGVVGIDGGWELYV    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_003510__    651 LGIALEKKFEGLNTPHKVKMAVSACPRNCAESGIKDLGVVGIDGGWELYV    700

BSNT_00581___    701 GGNGGTHLRAGDLLMKVKTNEEVLEYAGAYLQYYRETANYLERTSAWLER    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_003510__    701 GGNGGTHLRAGDLLMKVKTNEEVLEYAGAYLQYYRETANYLERTSAWLER    750

BSNT_00581___    751 VGLSHVQSVLNDPEKRQELNDRMNETLSVHKDPWKDFLEDKQTSKELFEN    800
                     ||||||||||||||||||||||||||||||||||:.||:||:.||:||||
RBAM_003510__    751 VGLSHVQSVLNDPEKRQELNDRMNETLSVHKDPWQYFLKDKKASKDLFEN    800

BSNT_00581___    801 VVTTS    805
                     |||||
RBAM_003510__    801 VVTTS    805


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