Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00576 and RBAM_003480

See DNA alignment / Visit BSNT_00576 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence pep-align/BSNT_00576___ycgT.1.9828.seq
#    -bsequence pep-align/RBAM_003480___ycgT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00576___ycgT-RBAM_003480___ycgT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00576___ycgT-RBAM_003480___ycgT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00576___ycgT
# 2: RBAM_003480___ycgT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     285/336 (84.8%)
# Similarity:   308/336 (91.7%)
# Gaps:           0/336 ( 0.0%)
# Score: 1480.0
# 
#
#=======================================

BSNT_00576___      1 MAENQEVYDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFF     50
                     ||||.||||||||||||||||.||||||||||||||||||:||||||:||
RBAM_003480__      1 MAENHEVYDVTIIGGGPIGLFAAFYCGMRELKTKVIEFLPRLGGKVSMFF     50

BSNT_00576___     51 PEKIIRDIGGIPGIAGKQLIEQLKEQAATFDPDIVLNQRVTGFERLDEGT    100
                     ||||||||||||||||:|||.|||||||||.|||||||||||||||::||
RBAM_003480__     51 PEKIIRDIGGIPGIAGEQLITQLKEQAATFKPDIVLNQRVTGFERLEDGT    100

BSNT_00576___    101 IVLTGSEGEKHYTRTVILACGMGTLEVNEFDSEDAARYAGKNLHYGVEKL    150
                     |||..||||||||||||||.|||||||||.||.||:||:||||||.||||
RBAM_003480__    101 IVLESSEGEKHYTRTVILAVGMGTLEVNELDSADASRYSGKNLHYKVEKL    150

BSNT_00576___    151 DAFKGKRVVISGGGDTAVDWANELEPIAASVTVVHRREEFGGMESSVTKM    200
                     |||:.|.||||||||||||||||||||||||||:||||||||:||||.||
RBAM_003480__    151 DAFRDKHVVISGGGDTAVDWANELEPIAASVTVLHRREEFGGLESSVAKM    200

BSNT_00576___    201 RQSSVRVLTPYRLEQLNGDKEGIKSVTVCHTESSQREDIEVDELIINHGF    250
                     ::||||||.||||:.|||..|.|:|||:|.|||...|.|::|||:|||||
RBAM_003480__    201 KRSSVRVLAPYRLKHLNGTGERIESVTICQTESGLSEVIKLDELVINHGF    250

BSNT_00576___    251 KIDLGPMMEWGLEIEGGRVKADRHMRTNLPGVFVAGDAAFYESKLRLIAG    300
                     |||||||.:||||||.||:||||||||||||||||||||.||||||||||
RBAM_003480__    251 KIDLGPMKDWGLEIEEGRIKADRHMRTNLPGVFVAGDAAHYESKLRLIAG    300

BSNT_00576___    301 GFTEGPTAVNSAKAYLDPKAENMAMYSTHHKKLVHK    336
                     ||||||||||||||||||:|:.||||||||||||.:
RBAM_003480__    301 GFTEGPTAVNSAKAYLDPQADQMAMYSTHHKKLVTQ    336


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