Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00576 and RBAM_003480
See
DNA alignment /
Visit
BSNT_00576 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence pep-align/BSNT_00576___ycgT.1.9828.seq
# -bsequence pep-align/RBAM_003480___ycgT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00576___ycgT-RBAM_003480___ycgT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00576___ycgT-RBAM_003480___ycgT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00576___ycgT
# 2: RBAM_003480___ycgT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity: 285/336 (84.8%)
# Similarity: 308/336 (91.7%)
# Gaps: 0/336 ( 0.0%)
# Score: 1480.0
#
#
#=======================================
BSNT_00576___ 1 MAENQEVYDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFF 50
||||.||||||||||||||||.||||||||||||||||||:||||||:||
RBAM_003480__ 1 MAENHEVYDVTIIGGGPIGLFAAFYCGMRELKTKVIEFLPRLGGKVSMFF 50
BSNT_00576___ 51 PEKIIRDIGGIPGIAGKQLIEQLKEQAATFDPDIVLNQRVTGFERLDEGT 100
||||||||||||||||:|||.|||||||||.|||||||||||||||::||
RBAM_003480__ 51 PEKIIRDIGGIPGIAGEQLITQLKEQAATFKPDIVLNQRVTGFERLEDGT 100
BSNT_00576___ 101 IVLTGSEGEKHYTRTVILACGMGTLEVNEFDSEDAARYAGKNLHYGVEKL 150
|||..||||||||||||||.|||||||||.||.||:||:||||||.||||
RBAM_003480__ 101 IVLESSEGEKHYTRTVILAVGMGTLEVNELDSADASRYSGKNLHYKVEKL 150
BSNT_00576___ 151 DAFKGKRVVISGGGDTAVDWANELEPIAASVTVVHRREEFGGMESSVTKM 200
|||:.|.||||||||||||||||||||||||||:||||||||:||||.||
RBAM_003480__ 151 DAFRDKHVVISGGGDTAVDWANELEPIAASVTVLHRREEFGGLESSVAKM 200
BSNT_00576___ 201 RQSSVRVLTPYRLEQLNGDKEGIKSVTVCHTESSQREDIEVDELIINHGF 250
::||||||.||||:.|||..|.|:|||:|.|||...|.|::|||:|||||
RBAM_003480__ 201 KRSSVRVLAPYRLKHLNGTGERIESVTICQTESGLSEVIKLDELVINHGF 250
BSNT_00576___ 251 KIDLGPMMEWGLEIEGGRVKADRHMRTNLPGVFVAGDAAFYESKLRLIAG 300
|||||||.:||||||.||:||||||||||||||||||||.||||||||||
RBAM_003480__ 251 KIDLGPMKDWGLEIEEGRIKADRHMRTNLPGVFVAGDAAHYESKLRLIAG 300
BSNT_00576___ 301 GFTEGPTAVNSAKAYLDPKAENMAMYSTHHKKLVHK 336
||||||||||||||||||:|:.||||||||||||.:
RBAM_003480__ 301 GFTEGPTAVNSAKAYLDPQADQMAMYSTHHKKLVTQ 336
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.