Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00480 and RBAM_003010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence pep-align/BSNT_00480___lip.1.9828.seq
# -bsequence pep-align/RBAM_003010___lip.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00480___lip-RBAM_003010___lip.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00480___lip-RBAM_003010___lip.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00480___lip
# 2: RBAM_003010___lip
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity: 163/214 (76.2%)
# Similarity: 185/214 (86.4%)
# Gaps: 2/214 ( 0.9%)
# Score: 846.5
#
#
#=======================================
BSNT_00480___ 1 MKFVKRRIVALVTILMLSVTSLFALQPSAKAAE--HNPVVMVHGIGGASF 48
||.:|.:|:.::|:.||||.|:||.||:...|. |||||||||||||||
RBAM_003010__ 1 MKHIKNKILVVLTVCMLSVISVFAFQPTVSKASSGHNPVVMVHGIGGASF 50
BSNT_00480___ 49 NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETG 98
||||||:||.||||||.::||:||.||||.|.:|.|.||.:|:|||.|||
RBAM_003010__ 51 NFAGIKTYLASQGWSRKEMYAIDFLDKTGNNRHNAPRLSNYVKKVLSETG 100
BSNT_00480___ 99 AKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGT 148
||||||||||||||||||||||||||:|:||||||||||.|.|.:|||||
RBAM_003010__ 101 AKKVDIVAHSMGGANTLYYIKNLDGGDKIANVVTLGGANGLVTNRALPGT 150
BSNT_00480___ 149 DPNQKILYTSIYSSADMIVMNYLSRLDGARNVQIHGVGHIGLLYSSQVNS 198
||||||||||||||||:||:|.||||.|.:|||||||||||||.:||||.
RBAM_003010__ 151 DPNQKILYTSIYSSADLIVLNPLSRLIGGKNVQIHGVGHIGLLMNSQVNG 200
BSNT_00480___ 199 LIKEGLNGGGQNTN 212
||||||||||||||
RBAM_003010__ 201 LIKEGLNGGGQNTN 214
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