Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00461 and RBAM_002920

See DNA alignment / Visit BSNT_00461 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_00461___cwlJ.1.9828.seq
#    -bsequence pep-align/RBAM_002920___cwlJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00461___cwlJ-RBAM_002920___cwlJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00461___cwlJ-RBAM_002920___cwlJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00461___cwlJ
# 2: RBAM_002920___cwlJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:     124/142 (87.3%)
# Similarity:   135/142 (95.1%)
# Gaps:           0/142 ( 0.0%)
# Score: 689.0
# 
#
#=======================================

BSNT_00461___      1 MAVVRATSADVDLMARLLRAEAEGEGKQGMLLVGNVGINRLRANCSDFKG     50
                     ||||:|:|||:|||||||||||||||||||||||||||||:|||||||||
RBAM_002920__      1 MAVVKASSADLDLMARLLRAEAEGEGKQGMLLVGNVGINRVRANCSDFKG     50

BSNT_00461___     51 LRTIRQMIYQPHAFEAVTHGYFYQRARDSERALARRSINGERRWPAKFSL    100
                     |||||||::||||||||||||||||.|:|||.||||:|||||.|||||||
RBAM_002920__     51 LRTIRQMVFQPHAFEAVTHGYFYQRPRESERRLARRTINGERFWPAKFSL    100

BSNT_00461___    101 WYFRPQGDCPAQWYNQPFVARFKSHCFYQPTAETCENVYNTF    142
                     |||:|.|:||..||:||||||||||||||||.||||||||||
RBAM_002920__    101 WYFKPPGNCPPTWYDQPFVARFKSHCFYQPTGETCENVYNTF    142


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