Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00424 and RBAM_002760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence pep-align/BSNT_00424___ybgE.1.9828.seq
# -bsequence pep-align/RBAM_002760___ybgE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00424___ybgE-RBAM_002760___ybgE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00424___ybgE-RBAM_002760___ybgE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00424___ybgE
# 2: RBAM_002760___ybgE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 265/357 (74.2%)
# Similarity: 313/357 (87.7%)
# Gaps: 2/357 ( 0.6%)
# Score: 1422.0
#
#
#=======================================
BSNT_00424___ 1 -MNKLIEREKTVYYKEKPDPSSLGFGQYFTDYMFVMDYEEGIGWHHPRIA 49
:|:||||.|....|||||.:|||||:|||||||||||||..|||.|||.
RBAM_002760__ 1 MLNQLIERRKVTARKEKPDSASLGFGKYFTDYMFVMDYEEERGWHDPRIT 50
BSNT_00424___ 50 PYAPLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSC 99
||.|:.||||:|||||||||||||||||::|||||:|||||||||||:|.
RBAM_002760__ 51 PYEPVHLDPSASVFHYGQAVFEGLKAYRSEDGRVLMFRPDQNIKRLNKSL 100
BSNT_00424___ 100 ERMSMPSLDEELVLEALTQLVELEKDWVPKKKGTSLYIRPFVIATEPSLG 149
.|||||.|||:|.||||.||||||::|:|.:|||||||||||||||||||
RBAM_002760__ 101 RRMSMPPLDEKLALEALIQLVELEQEWIPIEKGTSLYIRPFVIATEPSLG 150
BSNT_00424___ 150 VKASRSYTFMIVLSPVGSYYGDDQLKPVRIYVEDEYVRAVNGGVGFAKTA 199
|:.|:.|.||:||:||||||| |||||:||||||||||||.||||..||:
RBAM_002760__ 151 VRPSKRYKFMVVLTPVGSYYG-DQLKPIRIYVEDEYVRAVTGGVGDVKTS 199
BSNT_00424___ 200 GNYAASLQAQRKANELGYDQVLWLDAIEKKYVEEVGSMNIFFVINGEAVT 249
|||||||||||||.|||||||||||.:||||.||||||||||:|||||||
RBAM_002760__ 200 GNYAASLQAQRKAEELGYDQVLWLDGVEKKYAEEVGSMNIFFIINGEAVT 249
BSNT_00424___ 250 PALSGSILSGVTRASAIELIRSWGIPVREERISIDEVYAASARGELTEVF 299
|||:||||.|:||||.|||::||||.||||:::||::|.|:.|||::|||
RBAM_002760__ 250 PALNGSILGGITRASVIELLKSWGIRVREEQVAIDDIYEAAMRGEVSEVF 299
BSNT_00424___ 300 GTGTAAVVTPVGELNIHGKTVIVGDGQIGDLSKKLYETITDIQLGKVKGP 349
|||||||::|||.|:|||:|:.:.:|.||::|::|||||..||:|||:..
RBAM_002760__ 300 GTGTAAVISPVGALHIHGETIELNNGLIGEVSERLYETIAGIQVGKVRDS 349
BSNT_00424___ 350 FNWTVEV 356
|.|.|||
RBAM_002760__ 350 FRWVVEV 356
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