Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00388 and RBAM_002650

See DNA alignment / Visit BSNT_00388 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_00388___ybfG.1.9828.seq
#    -bsequence pep-align/RBAM_002650___ybfG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00388___ybfG-RBAM_002650___ybfG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00388___ybfG-RBAM_002650___ybfG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00388___ybfG
# 2: RBAM_002650___ybfG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 740
# Identity:     605/740 (81.8%)
# Similarity:   656/740 (88.6%)
# Gaps:          24/740 ( 3.2%)
# Score: 3154.5
# 
#
#=======================================

BSNT_00388___      1 MVDEMVLITQQWLNDTYSGKHGYNPVEESGKTGWDTIYGLTRALQIELGI     50
                      :|||||.||||||:||.|:||||.|.|:|||||||||||||||||||||
RBAM_002650__      1 -MDEMVLETQQWLNETYKGRHGYNKVPENGKTGWDTIYGLTRALQIELGI     49

BSNT_00388___     51 SEPADNFGPTTQRLFKPLKRQAPDSKPSNMNFILQGALWCKGFNPGGFTG    100
                     |||||||||||||||||||:|||||||:|||:||||||||||||||||:|
RBAM_002650__     50 SEPADNFGPTTQRLFKPLKKQAPDSKPTNMNYILQGALWCKGFNPGGFSG     99

BSNT_00388___    101 VFYEKTENAVKEFQKAAGLTTQDGIVTTLIMKALLDMSAFKLVSGGDSRI    150
                     ||||.||:||||||||||||.||||||.||||||||||||:||:|||.||
RBAM_002650__    100 VFYENTESAVKEFQKAAGLTKQDGIVTALIMKALLDMSAFRLVAGGDKRI    149

BSNT_00388___    151 RQIQQNLNRDYNDYIGLMPCDGLYGRDTNKALIYALQKEEGMSTSVANGF    200
                     ||||||||||||||||||||||||.|||||||||||||||.|||||||||
RBAM_002650__    150 RQIQQNLNRDYNDYIGLMPCDGLYARDTNKALIYALQKEESMSTSVANGF    199

BSNT_00388___    201 FGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGKSFDPGEFDGKYGVGVV    250
                     |||||||||||||||||||||||||||||||||::|||||||||||||||
RBAM_002650__    200 FGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGEAFDPGEFDGKYGVGVV    249

BSNT_00388___    251 SAVKAFQEFMRLPQTGYADMPTIKALLSSSGDTTRAASACDTATIITAEK    300
                     |||||||:||.|||||||||||||||||||||||||||.||||.|:||:.
RBAM_002650__    250 SAVKAFQKFMCLPQTGYADMPTIKALLSSSGDTTRAASTCDTAAILTADT    299

BSNT_00388___    301 AQTLRNNGYKTVGRYLTGNVRTSSGLTSKALTSKELAVILDAGLKVFPIY    350
                     |:|||.||||.|||||||||||||||||||||||||:.|.:|||.|||||
RBAM_002650__    300 AKTLRENGYKIVGRYLTGNVRTSSGLTSKALTSKELSTIFNAGLSVFPIY    349

BSNT_00388___    351 QDGGYESSYFVKDQGTRDAYSAASAARRLGFPSGTTIYFAVDFDAYDYEV    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002650__    350 QDGGYESSYFVKDQGTRDAYSAASAARRLGFPSGTTIYFAVDFDAYDYEV    399

BSNT_00388___    401 TDKIIPYFQEIKSAFTKMQTFSTAPKYEIGVYGPRNICIRTSEAGMTKYS    450
                     |||||||||||||||.|||.|||||||||||||||||||||||||:||||
RBAM_002650__    400 TDKIIPYFQEIKSAFMKMQAFSTAPKYEIGVYGPRNICIRTSEAGLTKYS    449

BSNT_00388___    451 FVANMSTGFSGNLGYPMPNNWAFDQFYEGTIGSGSGSIGIDKDGFSGRDS    500
                     |.||||||||||||||||.|||||||||||||||:|.:.|||||:||:||
RBAM_002650__    450 FTANMSTGFSGNLGYPMPKNWAFDQFYEGTIGSGAGKVAIDKDGYSGKDS    499

BSNT_00388___    501 GASNVNPPSDPVYDARLRTLTDILSTIPALENLTSLANAMFEFDTTETIF    550
                     |.|:|:||||||||||||||||||:|||||||:::|||||||||.||||:
RBAM_002650__    500 GVSSVHPPSDPVYDARLRTLTDILTTIPALENISNLANAMFEFDKTETIY    549

BSNT_00388___    551 TSPELDIILSTSLLATIPSEGSPNTITITNGKPGAYITGLLGDTQTSLTA    600
                     .|||:||:||||||||:||||||||:||||||||||||||:||:|.|.||
RBAM_002650__    550 ASPEMDILLSTSLLATVPSEGSPNTVTITNGKPGAYITGLMGDSQVSFTA    599

BSNT_00388___    601 SQIDSYQNLLNSLSLSVRNGYLEVYVNPTAESLNIQIKIYTPDIPVGDNV    650
                     ||||||||||||||||||||||||||||.|.|||||.|||||||||||:.
RBAM_002650__    600 SQIDSYQNLLNSLSLSVRNGYLEVYVNPAAGSLNIQFKIYTPDIPVGDSA    649

BSNT_00388___    651 TTGLTTTITFKIKTYKGVPVTSPESELALDWPSY-------DQYLFPVVG    693
                     ||||||||||||| .|...:...|...:.||.|.       ...:..:||
RBAM_002650__    650 TTGLTTTITFKIK-QKSFRLPDSEEVYSPDWDSVVNTMAIAGAGIIVIVG    698

BSNT_00388___    694 VAALLLIG-NMGSDLTNNKGVKVATALSAMLLAIFAYYTS    732
                     :.||:::. .:|.          |.||.:.:|::|.    
RBAM_002650__    699 IGALVVLAPELGG----------AAALFSTVLSLFL----    724


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.