Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00372 and RBAM_002570

See DNA alignment / Visit BSNT_00372 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_00372.1.9828.seq
#    -bsequence pep-align/RBAM_002570___ybyB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00372-RBAM_002570___ybyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00372-RBAM_002570___ybyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00372
# 2: RBAM_002570___ybyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 86
# Identity:      44/86 (51.2%)
# Similarity:    56/86 (65.1%)
# Gaps:          10/86 (11.6%)
# Score: 214.0
# 
#
#=======================================

BSNT_00372         1 MKQKLLLSGLAVSTVGITSYLLKDPSNRQKAREFIHSMKMKITKQPDMET     50
                     ||||||:|||||||||:|||||||.|||||...||.:||..::.:.|:|:
RBAM_002570__      1 MKQKLLISGLAVSTVGVTSYLLKDKSNRQKVMNFIRNMKTSLSGKQDIES     50

BSNT_00372        51 FPVDKAGHPDPQDSFRRLHVSRPILR----------     76
                     |||:|||:|.|:|......||...:.          
RBAM_002570__     51 FPVNKAGNPHPEDIEDNKMVSEGSMYPVQYYDDKKK     86


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