Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01388 and RBAM_002520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence pep-align/BSNT_01388___yfiN.1.9828.seq
# -bsequence pep-align/RBAM_002520___yfiN1.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01388___yfiN-RBAM_002520___yfiN1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01388___yfiN-RBAM_002520___yfiN1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01388___yfiN
# 2: RBAM_002520___yfiN1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 87/402 (21.6%)
# Similarity: 175/402 (43.5%)
# Gaps: 39/402 ( 9.7%)
# Score: 244.0
#
#
#=======================================
BSNT_01388___ 1 MKKILAICGIELSLIFKKPQNYLIMFA---APLLLTFVFGSMLSGNDDKV 47
|.::|.:...:|.|:. ||...:|| ||||||:.|.....|:..|
RBAM_002520__ 1 MTQLLFMIRHQLKLML---QNRAAIFATISAPLLLTYFFSFSADGSQQK- 46
BSNT_01388___ 48 RLAIVDQDDTILSQHYIRQLKAHDNMYTFESMSENKASDKLKQKKIAGII 97
.:.:.|:|.:..|..:::.::...:: ....::|:....|:..:.|:..:
RBAM_002520__ 47 EVYVADEDQSAYSAQFMKMIQKAGHI-KVTKVTEDVLKTKVHHQDISFGL 95
BSNT_01388___ 98 VISRSFQTQLEKGKHPELIFRHGPELSEAPMVKQYAESTLATLNIQVTAA 147
:|...|:..|..|....:.|....|..:|.:.:|........|...|..|
RBAM_002520__ 96 LIGSHFEETLFSGDELNVSFIQNEEKGDAVLTEQLIAQQAGALKKIVRDA 145
BSNT_01388___ 148 KTAAQTAGESWKAAYKTVFAKKHEDSAPAVKRQTLSDKKEGAEASDTASR 197
|..::|.....|.|...:.......||..|.|..: .||.:|:| |
RBAM_002520__ 146 KVISRTLHTDGKQAAADLLKDIQGHSAVNVDRHHV---YEGGQAAD---R 189
BSNT_01388___ 198 AAGFSILFVMLTMMGAAGTILEARKNGVWSRLLTASVSRVEIGAGYVLSF 247
..||.::|:....:.:..:.::.::|..:.|||:..||. ..|.:|.
RBAM_002520__ 190 LIGFLVMFIWFVAVQSLRSFIDEQENHTYDRLLSTPVSY----TAYAISK 235
BSNT_01388___ 248 FVIGWIQFGIL-----LLSTHWLIGINWGN---PAAVIVLVSLFLLTVVG 289
|...:: ||:| |.:..:::.|.:.: .|..::....|.||.|
RBAM_002520__ 236 FAAAYL-FGLLHIIVILAAGTFMLHIRFADHVFAAGAVLAACSFALTAV- 283
BSNT_01388___ 290 IGLMIAANVRTPEQQLAFGNLFVIATCMVSGMYWPIDIEPKFMQSIAEFL 339
.:.:...:::.:|..:..::|:..|.::...::.:|..|::||.::.|.
RBAM_002520__ 284 -TMAVIPFMKSQKQFTSLASVFIAVTGLLGEAFFTLDAAPEYMQMLSLFT 332
BSNT_01388___ 340 PQKWAMSGLTEIIANGARVTDILGICGILLAFAAITFAAGLKALRA---- 385
|:.||:..... ||.....|:.: .:.||..|.:....|..:..
RBAM_002520__ 333 PEIWAIGAFQN---NGGGSMQIVPL-SLFLAAGAASLVLSLYMINRHMKK 378
BSNT_01388___ 385 -- 385
RBAM_002520__ 379 NG 380
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