Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00250 and RBAM_001700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence pep-align/BSNT_00250___ybxA.1.9828.seq
# -bsequence pep-align/RBAM_001700___cbiO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00250___ybxA-RBAM_001700___cbiO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00250___ybxA-RBAM_001700___cbiO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00250___ybxA
# 2: RBAM_001700___cbiO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity: 249/281 (88.6%)
# Similarity: 272/281 (96.8%)
# Gaps: 0/281 ( 0.0%)
# Score: 1292.0
#
#
#=======================================
BSNT_00250___ 1 MNQNQLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKST 50
|:|.|||||:||:|||||||||.|||||||:|||||||||||||||||||
RBAM_001700__ 1 MDQKQLISVKDILFRYRKDAERPALDGVSLEVYEGEWLAIVGHNGSGKST 50
BSNT_00250___ 51 LARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTT 100
||||||||||||:|:|||.||:|||::||:||||||||||||||||||||
RBAM_001700__ 51 LARALNGLILPEAGEIEVGGIKLTEDTVWDVRKKIGMVFQNPDNQFVGTT 100
BSNT_00250___ 101 VRDDVAFGLENNGVPREEMIERVDWAVKQVNMQDFLDQEPHHLSGGQKQR 150
|||||||||||||||||||||||||||.||||||||||||||||||||||
RBAM_001700__ 101 VRDDVAFGLENNGVPREEMIERVDWAVTQVNMQDFLDQEPHHLSGGQKQR 150
BSNT_00250___ 151 VAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISIT 200
|||||:|||||||:||||||||||||||||||:|||.||:||||||||||
RBAM_001700__ 151 VAIAGIIAARPDIMILDEATSMLDPIGREEVLDTVRRLKDQGMATVISIT 200
BSNT_00250___ 201 HDLDEAAKADRIIVMNGGKKYAEGPPEEIFKLNKELVRIGLDLPFSFQLS 250
|||:|||:||||||||||:|||||.||||||||::|||||||||||||||
RBAM_001700__ 201 HDLEEAARADRIIVMNGGRKYAEGTPEEIFKLNEDLVRIGLDLPFSFQLS 250
BSNT_00250___ 251 QLLRENGLALEENHLTQEGLVKELWTLQSKM 281
.||:|:||||.:|||||||||.|||||:|||
RBAM_001700__ 251 LLLKESGLALTKNHLTQEGLVNELWTLKSKM 281
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