Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00219 and RBAM_001400

See DNA alignment / Visit BSNT_00219 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00219___rpsJ.1.9828.seq
#    -bsequence pep-align/RBAM_001400___rpsJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00219___rpsJ-RBAM_001400___rpsJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00219___rpsJ-RBAM_001400___rpsJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00219___rpsJ
# 2: RBAM_001400___rpsJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:     102/102 (100.0%)
# Similarity:   102/102 (100.0%)
# Gaps:           0/102 ( 0.0%)
# Score: 509.0
# 
#
#=======================================

BSNT_00219___      1 MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSVYT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001400__      1 MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSVYT     50

BSNT_00219___     51 ILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001400__     51 ILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEI    100

BSNT_00219___    101 KL    102
                     ||
RBAM_001400__    101 KL    102


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.