Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00208 and RBAM_001320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence pep-align/BSNT_00208___rpoB.1.9828.seq
# -bsequence pep-align/RBAM_001320___rpoB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00208___rpoB-RBAM_001320___rpoB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00208___rpoB-RBAM_001320___rpoB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00208___rpoB
# 2: RBAM_001320___rpoB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1196
# Identity: 1126/1196 (94.1%)
# Similarity: 1135/1196 (94.9%)
# Gaps: 50/1196 ( 4.2%)
# Score: 5800.0
#
#
#=======================================
BSNT_00208___ 0 -------------------------------------------------- 0
RBAM_001320__ 1 MNQLTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLRE 50
BSNT_00208___ 1 MFQDISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVR 50
|||||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_001320__ 51 MFQDISPIEDFTGNLSLEFIDYSLGDPKYPVEESKERDVTYSAPLRVKVR 100
BSNT_00208___ 51 LINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFS 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 101 LINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFS 150
BSNT_00208___ 101 GKVDKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLR 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 151 GKVDKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLR 200
BSNT_00208___ 151 ALGFGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 201 ALGFGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPT 250
BSNT_00208___ 201 VENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDP 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 251 VENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDP 300
BSNT_00208___ 251 ETGEILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSI 300
|||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_001320__ 301 ETGEILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVMLQSI 350
BSNT_00208___ 301 KIFAPTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGD 350
||:||||.||||.|||||||||||.|||||||||||||||||||||||||
RBAM_001320__ 351 KIYAPTDAEGEQTINVIGNAYIEEAIKNITPADIISSISYFFNLLHGVGD 400
BSNT_00208___ 351 TDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQ 400
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 401 TDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQ 450
BSNT_00208___ 401 LINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRE 450
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 451 LINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRE 500
BSNT_00208___ 451 RAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPY 500
||||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_001320__ 501 RAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFGFIETPY 550
BSNT_00208___ 501 RRVDPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFR 550
|||||||||||.||||||||||||||||||||:|.|:|:|:|||||||||
RBAM_001320__ 551 RRVDPETGKVTPRIDYLTADEEDNYVVAQANAKLSDDGSFLDDSIVARFR 600
BSNT_00208___ 551 GENTVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQA 600
||||||:|||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 601 GENTVVARNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQA 650
BSNT_00208___ 601 VPLMQPEAPFVGTGMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEE 650
|||||||||.||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 651 VPLMQPEAPIVGTGMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEE 700
BSNT_00208___ 651 VDGQKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPS 700
:|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 701 IDGQKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPS 750
BSNT_00208___ 701 MELGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYES 750
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 751 MELGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYES 800
BSNT_00208___ 751 EARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVT 800
|||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_001320__ 801 EARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVNDGDLLVGKVT 850
BSNT_00208___ 801 PKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNRED 850
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 851 PKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNRED 900
BSNT_00208___ 851 GDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYL 900
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 901 GDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYL 950
BSNT_00208___ 901 PDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGARE 950
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 951 PDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGARE 1000
BSNT_00208___ 951 EDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDK 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 1001 EDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDK 1050
BSNT_00208___ 1001 LHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 1051 LHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILT 1100
BSNT_00208___ 1051 VKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001320__ 1101 VKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSG 1150
BSNT_00208___ 1101 DEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE 1146
||||||||||||||||||||||||||||.||||||.|||||.||||
RBAM_001320__ 1151 DEEEIEMRDLEDEEDAKQADGLALSGDEAPEETASPDVERDAVTKE 1196
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.