Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00200 and RBAM_001260

See DNA alignment / Visit BSNT_00200 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_00200___nusG.1.9828.seq
#    -bsequence pep-align/RBAM_001260___nusG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00200___nusG-RBAM_001260___nusG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00200___nusG-RBAM_001260___nusG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00200___nusG
# 2: RBAM_001260___nusG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     176/177 (99.4%)
# Similarity:   176/177 (99.4%)
# Gaps:           0/177 ( 0.0%)
# Score: 912.0
# 
#
#=======================================

BSNT_00200___      1 MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKN     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001260__      1 MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKN     50

BSNT_00200___     51 GKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001260__     51 GKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTP    100

BSNT_00200___    101 LLPGEAETILKRMGMDERKTDIDFELKETVKVIDGPFANFTGSIEEIDYD    150
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_001260__    101 LLPGEAETILKRMGMDERKTDIDFELNETVKVIDGPFANFTGSIEEIDYD    150

BSNT_00200___    151 KSKVKVFVNMFGRETPVELEFTQIDKL    177
                     |||||||||||||||||||||||||||
RBAM_001260__    151 KSKVKVFVNMFGRETPVELEFTQIDKL    177


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