Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00185 and RBAM_001150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence pep-align/BSNT_00185___ispD.1.9828.seq
# -bsequence pep-align/RBAM_001150___ispD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00185___ispD-RBAM_001150___ispD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00185___ispD-RBAM_001150___ispD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00185___ispD
# 2: RBAM_001150___ispD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 170/232 (73.3%)
# Similarity: 195/232 (84.1%)
# Gaps: 0/232 ( 0.0%)
# Score: 877.0
#
#
#=======================================
BSNT_00185___ 1 MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKII 50
|.|.|||||||||||||||:|||||.|||.||||||||||:||..|.|||
RBAM_001150__ 1 MEYVVVIPAAGQGKRMKAGKNKLFISLKGAPVIIHTLRVFESHAPCQKII 50
BSNT_00185___ 51 LVINEQEREHFQQLLCDYPFQTSIELVAGGEERQHSVYKGLKAVKQEKIV 100
|||||.|||.|:|||..:|.||.||||.||.|||||||:|||.:.:|.:|
RBAM_001150__ 51 LVINESEREDFRQLLAQFPIQTEIELVTGGAERQHSVYEGLKMIDKESVV 100
BSNT_00185___ 101 LVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQDLQVSETI 150
|||||||||:.|:.||:|:..||:.|||:|||||||||||.:..:|:||.
RBAM_001150__ 101 LVHDGARPFVTHQHIDKLVETAEEAGAAVLAVPVKDTIKRAEGSRVAETF 150
BSNT_00185___ 151 ERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRV 200
:||||||||||||||||||..||.|||.|||||||||||||:::|..|.:
RBAM_001150__ 151 DRSSLWAVQTPQAFRLSLLKTAHMEAENKGFLGTDDASLVERLDGYQVSI 200
BSNT_00185___ 201 VEGSYTNIKLTTPDDLTSAEAIMESESGNKHV 232
||||||||||||||||..|||||::||||.:|
RBAM_001150__ 201 VEGSYTNIKLTTPDDLIFAEAIMKAESGNHNV 232
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