Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00185 and RBAM_001150

See DNA alignment / Visit BSNT_00185 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_00185___ispD.1.9828.seq
#    -bsequence pep-align/RBAM_001150___ispD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00185___ispD-RBAM_001150___ispD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00185___ispD-RBAM_001150___ispD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00185___ispD
# 2: RBAM_001150___ispD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity:     170/232 (73.3%)
# Similarity:   195/232 (84.1%)
# Gaps:           0/232 ( 0.0%)
# Score: 877.0
# 
#
#=======================================

BSNT_00185___      1 MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKII     50
                     |.|.|||||||||||||||:|||||.|||.||||||||||:||..|.|||
RBAM_001150__      1 MEYVVVIPAAGQGKRMKAGKNKLFISLKGAPVIIHTLRVFESHAPCQKII     50

BSNT_00185___     51 LVINEQEREHFQQLLCDYPFQTSIELVAGGEERQHSVYKGLKAVKQEKIV    100
                     |||||.|||.|:|||..:|.||.||||.||.|||||||:|||.:.:|.:|
RBAM_001150__     51 LVINESEREDFRQLLAQFPIQTEIELVTGGAERQHSVYEGLKMIDKESVV    100

BSNT_00185___    101 LVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQDLQVSETI    150
                     |||||||||:.|:.||:|:..||:.|||:|||||||||||.:..:|:||.
RBAM_001150__    101 LVHDGARPFVTHQHIDKLVETAEEAGAAVLAVPVKDTIKRAEGSRVAETF    150

BSNT_00185___    151 ERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRV    200
                     :||||||||||||||||||..||.|||.|||||||||||||:::|..|.:
RBAM_001150__    151 DRSSLWAVQTPQAFRLSLLKTAHMEAENKGFLGTDDASLVERLDGYQVSI    200

BSNT_00185___    201 VEGSYTNIKLTTPDDLTSAEAIMESESGNKHV    232
                     ||||||||||||||||..|||||::||||.:|
RBAM_001150__    201 VEGSYTNIKLTTPDDLIFAEAIMKAESGNHNV    232


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