Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00118 and RBAM_000770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence pep-align/BSNT_00118.1.9828.seq
# -bsequence pep-align/RBAM_000770___yabT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00118-RBAM_000770___yabT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00118-RBAM_000770___yabT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00118
# 2: RBAM_000770___yabT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 223/338 (66.0%)
# Similarity: 249/338 (73.7%)
# Gaps: 46/338 (13.6%)
# Score: 1152.5
#
#
#=======================================
BSNT_00118 1 -----------------------------------------MYLAEASDG 9
:||||||.|
RBAM_000770__ 1 MMNDALTSLACSLAPGTAIQGKWNGKSYRLLKQLGKGANGIVYLAEASGG 50
BSNT_00118 10 HVALKVSDDSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDTYIPGTNTKV 59
.||||:|.||:|:|||||||||||||:|.||||||||.||.:||..|..|
RBAM_000770__ 51 QVALKISSDSMSVTSEVNVLKSFSKARSQTMGPSFFDADDAFIPQLNKNV 100
BSNT_00118 60 SFYAMEYIKGPLLLKYVSDKGGEWIPVLMIQLLSSLSVLHQQGWIFGDLK 109
|||.||||:||||.:|:|.||.|||||||:||||||||||||||:|||||
RBAM_000770__ 101 SFYVMEYIEGPLLPQYISSKGAEWIPVLMVQLLSSLSVLHQQGWVFGDLK 150
BSNT_00118 110 PDNLIVTGPPARIRCIDVGGTTKEGRAIKEYTEFYDRGYWGYGTRKAEPS 159
|||||||||||.|||||||||||:||||||||||||||||||||||||||
RBAM_000770__ 151 PDNLIVTGPPAAIRCIDVGGTTKQGRAIKEYTEFYDRGYWGYGTRKAEPS 200
BSNT_00118 160 YDLFAVAMIMINSVHKKEFKKTNQPKEQLRSLIEGNPLLQKYKKALFSAL 209
|||||||||||:...|||.||:.||||||||:|||:|.|.||||.|||||
RBAM_000770__ 201 YDLFAVAMIMIHCAQKKECKKSGQPKEQLRSIIEGHPFLNKYKKVLFSAL 250
BSNT_00118 210 NGDYQSADEMKKDMLDAGQKAAQRKQHIKASPQPATRQRQQIPRQRKITK 259
||.|.||:.||.|:|.|||.|.. |:...|.|:|. |..|:|..:::
RBAM_000770__ 251 NGQYPSAEAMKHDILTAGQSAGS-KRKAAAKPKPP----QSKPQQGTVSQ 295
BSNT_00118 260 TRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI 297
|||.|||||||..||||||||:|||||||||||:||||
RBAM_000770__ 296 TRYKPKQKPAKHNGLFETTLILISVLALYFAYIVFFLI 333
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