Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00079 and RBAM_000520

See DNA alignment / Visit BSNT_00079 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00079___yabG.1.9828.seq
#    -bsequence pep-align/RBAM_000520___yabG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00079___yabG-RBAM_000520___yabG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00079___yabG-RBAM_000520___yabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00079___yabG
# 2: RBAM_000520___yabG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     268/291 (92.1%)
# Similarity:   282/291 (96.9%)
# Gaps:           1/291 ( 0.3%)
# Score: 1420.0
# 
#
#=======================================

BSNT_00079___      1 MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDF     50
                     |||||||||||||||||||||||||||||.|||||||||||||||||:||
RBAM_000520__      1 MQFQIGDMVARKSYQMDVLFRIIGIEQTSNGNSIAILHGDEVRLIADADF     50

BSNT_00079___     51 SDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQH    100
                     |||..|:||||.||||:||||||||||||||||||||||||||||:||||
RBAM_000520__     51 SDLEPVRKDEQAMRKKRDESRMNESLELLRQDYKLLREKQEYYATNQYQH    100

BSNT_00079___    101 QEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIE    150
                     ||||||||||||||||||||||||||.|:||||||||||||||||.|||:
RBAM_000520__    101 QEHYFHMPGKVLHLDGDEAYLKKCLNFYEKIGVPVYGIHCHEKKMPASID    150

BSNT_00079___    151 ELLDKYRPDILVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIP    200
                     |||||||||||||||||||||.|||::||:|||||||||||||.||:|:|
RBAM_000520__    151 ELLDKYRPDILVITGHDAYSKHKGGVNDLSAYRHSKHFVETVQRARRKVP    200

BSNT_00079___    201 HLDQLVIFAGACQSHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000520__    201 HLDQLVIFAGACQSHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFT    250

BSNT_00079___    251 PFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN-    290
                     |||||||||:|||||||||||||||||:||||:||||||| 
RBAM_000520__    251 PFMERINVWDVLRNTLTREKGLGGIETKGVLRVGMPYKSNG    291


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