Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00073 and RBAM_000480

See DNA alignment / Visit BSNT_00073 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_00073___yabD.1.9828.seq
#    -bsequence pep-align/RBAM_000480___yabD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00073___yabD-RBAM_000480___yabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00073___yabD-RBAM_000480___yabD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00073___yabD
# 2: RBAM_000480___yabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     235/256 (91.8%)
# Similarity:   249/256 (97.3%)
# Gaps:           1/256 ( 0.4%)
# Score: 1251.0
# 
#
#=======================================

BSNT_00073___      1 -MLFDTHAHLNAEQYDTDLDEVIERAKAEKVERIVVVGFDRPTITRAMEM     49
                      |||||||||||||:||||:|||.|||||:||||||||||:||||||||:
RBAM_000480__      1 MMLFDTHAHLNAEQFDTDLEEVIARAKAEEVERIVVVGFDKPTITRAMEL     50

BSNT_00073___     50 IEEYDFIYAAIGWHPVDAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHW     99
                     ||||||||||||||||||||||||||:||||||:||||||||||||||||
RBAM_000480__     51 IEEYDFIYAAIGWHPVDAIDMTEEDLSWIKELSSHEKVVAIGEMGLDYHW    100

BSNT_00073___    100 DKSPKDIQKEVFRKQIALAKEVNLPIIIHNRDATEDVVTILKEEGAEAVG    149
                     ||||||:||||||||||||||||||||||||||||||||||||||||.||
RBAM_000480__    101 DKSPKDVQKEVFRKQIALAKEVNLPIIIHNRDATEDVVTILKEEGAEEVG    150

BSNT_00073___    150 GIMHCFTGSAEVARECMKMNFYLSFGGPVTFKNAKKPKEVVKEIPNDRLL    199
                     ||||||||||||||:||.||||:|||||||||||||||||.|||||||||
RBAM_000480__    151 GIMHCFTGSAEVARQCMDMNFYISFGGPVTFKNAKKPKEVAKEIPNDRLL    200

BSNT_00073___    200 IETDCPFLTPHPFRGKRNEPSYVKYVAEQIAELKEMTFEEIASITTENAK    249
                     |||||||||||||||||||||||||||||:||||.:|:||||||||||||
RBAM_000480__    201 IETDCPFLTPHPFRGKRNEPSYVKYVAEQLAELKGLTYEEIASITTENAK    250

BSNT_00073___    250 RLFRIN    255
                     |||.:|
RBAM_000480__    251 RLFCMN    256


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