Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00059 and RBAM_000360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence pep-align/BSNT_00059___yaaO.1.9828.seq
# -bsequence pep-align/RBAM_000360___yaaO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00059___yaaO-RBAM_000360___yaaO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00059___yaaO-RBAM_000360___yaaO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00059___yaaO
# 2: RBAM_000360___yaaO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity: 315/480 (65.6%)
# Similarity: 386/480 (80.4%)
# Gaps: 3/480 ( 0.6%)
# Score: 1658.5
#
#
#=======================================
BSNT_00059___ 1 MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTEL 50
|.||||.||::||.||::|||||||||||||||:|||::..||:||:||:
RBAM_000360__ 1 METPLYTALMKHAHRNTYSFHVPGHHNGDVFFDEAKSVYQSLLSIDMTEI 50
BSNT_00059___ 51 AGLDDLHHPSGVIKEAQELVSQLYGSAESFFLVNGTTVGNLAMILSVCEP 100
.||||||||:|||||||:|||:.|||.||||||||||.|||||||:||||
RBAM_000360__ 51 TGLDDLHHPTGVIKEAQDLVSRFYGSQESFFLVNGTTAGNLAMILAVCEP 100
BSNT_00059___ 101 GDTILVQRNCHKSVFHAVDLAGAKPVYLAPDVDSAMHVPTHVPLGTIKEA 150
|:.||:|||||||||||..|||||||||||::|..||||.||.|..|::|
RBAM_000360__ 101 GEPILIQRNCHKSVFHAAALAGAKPVYLAPEIDENMHVPAHVSLSVIEKA 150
BSNT_00059___ 151 LEAYPDAKGLVLTNPTYYGHSADLTEIITEAHHYGIPVLVDEAHGAHFIL 200
|.:||:||||||||||||||:||||..:.:||.||:||||||||||||:|
RBAM_000360__ 151 LASYPNAKGLVLTNPTYYGHAADLTAAVNKAHSYGVPVLVDEAHGAHFVL 200
BSNT_00059___ 201 GEPFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEYL 250
|:|||.|:|.||||.|||||||||||||||||.||||: ||:|||:..|:
RBAM_000360__ 201 GQPFPPSSLAMGADAVVQSAHKTLPAMTMGSYFHLNST-RIDRDRLTYYV 249
BSNT_00059___ 251 NRLQSSSPSYPIMASLDIARAYVQHIIEEQKLSDILQRIQTLKQTFDSLT 300
:.|||||||||||||||.||||||.|.|:..|...::.|:.:|::|.|::
RBAM_000360__ 250 SSLQSSSPSYPIMASLDTARAYVQDIAEKGTLPVHMEHIEKIKRSFASIS 299
BSNT_00059___ 301 NAEAVNPANPLIITDPLKLTIRSKRGHSGYTLQSILERANIFTELADENQ 350
:.|.:.|:...:..|||||.:|||.|||||:||.|||..:|..|||||.|
RBAM_000360__ 300 SIEIIEPSGYGLRADPLKLILRSKLGHSGYSLQRILESEDIVAELADEYQ 349
BSNT_00059___ 351 VLLVLPLGGKRRINAETIRSIDEKIEKTPPDQAFVSAEWGVQPVTVLPYP 400
||||||:||:|.|...|:|:|.:|:|.||||:...:..|....::.|.||
RBAM_000360__ 350 VLLVLPIGGRRMIEQATVRNIQQKLENTPPDKLPDAVRWTFPSISTLEYP 399
BSNT_00059___ 401 KKVLHSFKKEYVDFEEATGRLNAEDIIPYPPGIPMIMAGERITKESVQKL 450
:..:..|||:..|..:|.|||:|.:|||||||||:||.|||||:|.||||
RBAM_000360__ 400 QNEMRKFKKKPADINKAAGRLHAGNIIPYPPGIPLIMDGERITEEIVQKL 449
BSNT_00059___ 451 SRLISMKTHVQGNMKIKEKQLLVYIEEEKS 480
||||.|.||:|| .:..:|||||||||||
RBAM_000360__ 450 SRLIGMDTHIQG--LLNGEQLLVYIEEEKS 477
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